Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007390.1-P | Field mustard | cytosol | 90.65 | 90.65 |
| CDX88982 | Canola | cytosol | 27.24 | 57.27 |
| CDY00561 | Canola | cytosol | 28.05 | 46.0 |
| AT3G58340.1 | Thale cress | cytosol | 57.72 | 43.69 |
| CDY00562 | Canola | cytosol | 41.87 | 43.28 |
| CDX98278 | Canola | cytosol | 38.21 | 42.92 |
| CDX88985 | Canola | extracellular | 32.52 | 41.67 |
| CDX71958 | Canola | cytosol | 50.81 | 41.53 |
| CDX88983 | Canola | cytosol | 46.75 | 41.52 |
| CDX67741 | Canola | cytosol | 30.49 | 41.44 |
| CDX98281 | Canola | cytosol | 41.06 | 40.89 |
| CDY06042 | Canola | cytosol | 50.0 | 39.94 |
| CDX88984 | Canola | cytosol | 50.41 | 39.87 |
| CDX67732 | Canola | cytosol | 46.34 | 39.72 |
| CDY53703 | Canola | cytosol | 43.9 | 39.71 |
| CDY00566 | Canola | cytosol | 46.75 | 39.66 |
| CDY06045 | Canola | cytosol | 49.19 | 39.54 |
| CDX90477 | Canola | cytosol | 43.5 | 39.34 |
| CDY23318 | Canola | cytosol | 41.87 | 38.87 |
| CDX98280 | Canola | cytosol | 45.12 | 38.68 |
| CDY23317 | Canola | cytosol | 42.68 | 38.6 |
| CDX67742 | Canola | cytosol | 47.97 | 37.82 |
| CDX88981 | Canola | extracellular | 33.33 | 37.79 |
| CDX67730 | Canola | cytosol | 45.53 | 37.71 |
| CDX98291 | Canola | cytosol | 43.9 | 37.5 |
| CDY00560 | Canola | cytosol | 16.26 | 37.38 |
| CDY52912 | Canola | cytosol | 44.72 | 36.91 |
| CDX67729 | Canola | cytosol | 39.84 | 36.57 |
| CDY06047 | Canola | cytosol | 48.37 | 36.5 |
| CDX69523 | Canola | cytosol | 41.46 | 36.17 |
| CDY00567 | Canola | plastid | 28.86 | 35.68 |
| CDX98279 | Canola | cytosol | 38.21 | 34.81 |
| CDX88978 | Canola | cytosol | 38.62 | 34.67 |
| CDY00554 | Canola | cytosol | 38.21 | 34.18 |
| CDX71959 | Canola | cytosol | 84.55 | 34.15 |
| CDX67733 | Canola | cytosol | 44.72 | 33.64 |
| CDX71960 | Canola | cytosol | 19.51 | 33.33 |
| CDY17006 | Canola | cytosol | 34.96 | 32.95 |
| CDX98282 | Canola | cytosol | 34.15 | 32.56 |
| CDY06046 | Canola | cytosol | 75.61 | 32.24 |
| CDY00564 | Canola | cytosol | 22.36 | 28.5 |
| CDY09631 | Canola | cytosol | 11.38 | 26.67 |
| CDX98283 | Canola | mitochondrion | 42.68 | 26.38 |
| CDY06043 | Canola | cytosol, golgi, mitochondrion, peroxisome | 40.24 | 23.52 |
| CDX67743 | Canola | nucleus | 39.02 | 22.97 |
| CDX84400 | Canola | nucleus | 9.35 | 18.85 |
| CDX88980 | Canola | cytosol | 45.94 | 18.83 |
| CDX67734 | Canola | cytosol | 34.96 | 18.82 |
| CDY00558 | Canola | cytosol | 44.72 | 18.33 |
| CDY17817 | Canola | cytosol | 13.01 | 17.98 |
| CDX98294 | Canola | plastid | 27.64 | 17.89 |
| CDX98284 | Canola | cytosol | 41.87 | 17.58 |
| CDY00559 | Canola | nucleus | 5.69 | 7.14 |
| CDX67728 | Canola | cytosol | 0.41 | 2.38 |
Protein Annotations
| EnsemblPlants:CDY06044 | EnsemblPlantsGene:GSBRNA2T00121898001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR24007 | PANTHER:PTHR24007:SF12 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY06044 | ProteinID:CDY06044.1 | SMART:SM00061 | SUPFAM:SSF49599 |
| UniParc:UPI0004EF2BE7 | MapMan:35.1 | : | : | : | : |
Description
BnaA09g37360D
Coordinates
chrLK031967:+:438393..439665
Molecular Weight (calculated)
27850.5 Da
IEP (calculated)
5.390
GRAVY (calculated)
-0.124
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNPNKKSFA WLIENFSSLP SDKLYSAPVL ISGLYWDLFT YPKGYKGGDS LVVSLAVTDG QSLPSGWARY VKFRLTIVNH LSHELSIHRE TNIWFDEKAP
101: GWGLSGMLPF AKLHDKDGGF LVNDELKIVA EIEALEVIGT LDESKDLLDK TCIDVNGFQV LPSQVEAVRR MFERHPDIAL DFRAKNQYLR TACMNFLLSL
201: SEMLPKSLEK FSDEDLVEAG IALTYLKNVG FKVDWLEKSL DQVKRT
101: GWGLSGMLPF AKLHDKDGGF LVNDELKIVA EIEALEVIGT LDESKDLLDK TCIDVNGFQV LPSQVEAVRR MFERHPDIAL DFRAKNQYLR TACMNFLLSL
201: SEMLPKSLEK FSDEDLVEAG IALTYLKNVG FKVDWLEKSL DQVKRT
001: MAKAVDKKFC WEIKNFSSLN SERCHSVPVV IGDCKWRLVA FPKGYKADYL SLYLEVADFK SLPSGWRRYV KFRACIVNQL SQELSVQQET QRWFDQNAPG
101: WGFENMLLLT ELNAKDGGFL VNGQVMIVAE VEFLEVIGTL DESEKTQEVA QQVKEIIQPN DLINKTQEVA QQVKESIDVN GFQVLPSQVE SVRRIFKKHP
201: DIAVGFQVKN QHLRKTFMNF LVNVIETMCQ SLQELSNEDL VEVDIALTYL KDAGFKVDWL EKKLDHVKEK KEKEQSGLII LQGIEQQLHE LMHKCEKKKS
301: EVLSVGAPLK FDDVV
101: WGFENMLLLT ELNAKDGGFL VNGQVMIVAE VEFLEVIGTL DESEKTQEVA QQVKEIIQPN DLINKTQEVA QQVKESIDVN GFQVLPSQVE SVRRIFKKHP
201: DIAVGFQVKN QHLRKTFMNF LVNVIETMCQ SLQELSNEDL VEVDIALTYL KDAGFKVDWL EKKLDHVKEK KEKEQSGLII LQGIEQQLHE LMHKCEKKKS
301: EVLSVGAPLK FDDVV
Arabidopsis Description
MATH domain and coiled-coil domain-containing protein At3g58340 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2I2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.