Factsheet for AT3G44800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G44790.1	Thale cress	cytosol	66.37	70.06
CDX69523	Canola	cytosol	43.86	53.19
AT3G58210.1	Thale cress	plastid	50.88	52.73
AT3G58200.1	Thale cress	cytosol	49.12	52.66
AT3G44805.1	Thale cress	cytosol	37.13	51.21
AT3G58350.1	Thale cress	cytosol	44.74	50.83
AT3G58360.1	Thale cress	cytosol	43.86	50.34
AT3G58370.1	Thale cress	cytosol	43.86	49.67
AT2G05410.2	Thale cress	cytosol	43.27	48.84
AT3G58270.3	Thale cress	cytosol	47.95	47.81
AT2G05420.1	Thale cress	cytosol	41.23	47.47
AT3G58340.1	Thale cress	cytosol	44.74	47.08
AT3G58250.1	Thale cress	cytosol	43.57	47.0
AT2G01790.1	Thale cress	cytosol	36.84	46.84
Bra008697.1-P	Field mustard	plastid	24.56	46.67
CDY09631	Canola	cytosol	14.33	46.67
AT2G05400.3	Thale cress	cytosol	29.53	46.54
AT1G31390.1	Thale cress	cytosol	36.26	46.27
AT3G58410.1	Thale cress	cytosol	44.15	46.04
AT3G58400.1	Thale cress	extracellular	39.18	45.73
AT1G31400.1	Thale cress	cytosol	37.13	45.68
AT3G58260.1	Thale cress	cytosol, golgi, mitochondrion, plastid	42.4	45.17
AT3G27040.1	Thale cress	cytosol	35.67	45.02
AT1G31380.1	Thale cress	cytosol	22.81	44.57
Bra012666.1-P	Field mustard	cytosol	34.21	43.01
CDX90477	Canola	cytosol	34.21	43.01
AT3G29580.1	Thale cress	cytosol	37.13	41.5
AT1G31370.1	Thale cress	cytosol	23.39	41.45
AT3G58380.1	Thale cress	cytosol	36.84	41.04
AT3G58240.1	Thale cress	cytosol	38.01	41.01
AT3G58320.1	Thale cress	nucleus	25.15	38.39
AT3G58220.2	Thale cress	cytosol	44.74	33.77
AT3G58430.1	Thale cress	cytosol	40.06	29.09
AT3G58440.1	Thale cress	cytosol	40.94	23.29

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.1	EntrezGene:823613	ProteinID:AAB70027.1	ProteinID:AEE77955.2	ArrayExpress:AT3G44800
EnsemblPlantsGene:AT3G44800	RefSeq:AT3G44800	TAIR:AT3G44800	RefSeq:AT3G44800-TAIR-G	EnsemblPlants:AT3G44800.1	TAIR:AT3G44800.1
ncoils:Coil	UniProt:F4J4A1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0008150	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	RefSeq:NP_190066.3	PFAM:PF00917
PFscan:PS50144	PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	SMART:SM00061	SUPFAM:SSF49599	InterPro:TRAF-like
UniParc:UPI00045BE149	SEG:seg	:	:	:	:

Description

MATH domain and coiled-coil domain-containing protein At3g44800 [Source:UniProtKB/Swiss-Prot;Acc:F4J4A1]

Coordinates

chr3:+:16343333..16344834

Molecular Weight (calculated)

38989.5 Da

IEP (calculated)

9.040

GRAVY (calculated)

-0.351

Length

342 amino acids

Sequence
(BLAST)

001: MGYEKFTWVI KNFSSLQSEY IKSDIFVIGG CKWCLLAYPN GKQNASYLSL YLDGPTLKTL PCGCRRRIRF RLTVVNQLSE NLSRRGEGKR WFDKKLPLCG
101: YEEVLLLTKL NAKHGGFLVN NEVKIVAEVD VLEVIGKLDV SKESQEVIKP RKRMRLYGDG GAVSSHLHKE TSSVDVNGFQ VLPSQAESVK RIFERHPYMA
201: LEFRAKNQQL RASCINVLLS LIKTLCQSLQ DISIDDLGQT EQVLTFLQNS GFKVDWLERK LEEVKEKKIQ EHIGKSRMQG LEEDLKVFKK KCSDIEALLE
301: KEKEELKGLK QKCSDIEALL EKEKGKVLAA AARTPLTFDD IL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.