Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G27040.1 | Thale cress | cytosol | 73.23 | 72.69 |
| CDY23318 | Canola | cytosol | 59.85 | 60.75 |
| CDY23317 | Canola | cytosol | 56.88 | 56.25 |
| CDY53703 | Canola | cytosol | 56.51 | 55.88 |
| AT1G31380.1 | Thale cress | cytosol | 34.2 | 52.57 |
| AT1G31390.1 | Thale cress | cytosol | 48.7 | 48.88 |
| AT1G31400.1 | Thale cress | cytosol | 48.7 | 47.12 |
| AT3G58360.1 | Thale cress | cytosol | 47.96 | 43.29 |
| AT3G58370.1 | Thale cress | cytosol | 48.33 | 43.05 |
| AT1G31370.1 | Thale cress | cytosol | 30.86 | 43.01 |
| AT3G58350.1 | Thale cress | cytosol | 47.96 | 42.86 |
| AT2G05410.2 | Thale cress | cytosol | 47.96 | 42.57 |
| AT3G58260.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 49.81 | 41.74 |
| AT3G58250.1 | Thale cress | cytosol | 49.07 | 41.64 |
| AT2G05420.1 | Thale cress | cytosol | 45.35 | 41.08 |
| AT3G58400.1 | Thale cress | extracellular | 43.87 | 40.27 |
| AT3G58210.1 | Thale cress | plastid | 47.58 | 38.79 |
| AT2G05400.3 | Thale cress | cytosol | 31.23 | 38.71 |
| AT3G58200.1 | Thale cress | cytosol | 45.35 | 38.24 |
| AT3G44790.1 | Thale cress | cytosol | 45.35 | 37.65 |
| AT3G58270.3 | Thale cress | cytosol | 47.96 | 37.61 |
| AT3G58340.1 | Thale cress | cytosol | 44.98 | 37.23 |
| AT3G44800.1 | Thale cress | cytosol | 46.84 | 36.84 |
| AT3G29580.1 | Thale cress | cytosol | 40.89 | 35.95 |
| AT3G58410.1 | Thale cress | cytosol | 42.75 | 35.06 |
| AT3G58380.1 | Thale cress | cytosol | 39.03 | 34.2 |
| AT3G58240.1 | Thale cress | cytosol | 39.78 | 33.75 |
| AT3G58320.1 | Thale cress | nucleus | 23.79 | 28.57 |
| AT3G58220.2 | Thale cress | cytosol | 43.49 | 25.83 |
| AT3G44805.1 | Thale cress | cytosol | 23.79 | 25.81 |
| AT3G58430.1 | Thale cress | cytosol | 39.41 | 22.51 |
| AT3G58440.1 | Thale cress | cytosol | 37.55 | 16.81 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.1 | EntrezGene:814710 | ProteinID:AAD12693.1 | ProteinID:AEC05498.1 | ArrayExpress:AT2G01790 |
| EnsemblPlantsGene:AT2G01790 | RefSeq:AT2G01790 | TAIR:AT2G01790 | RefSeq:AT2G01790-TAIR-G | EnsemblPlants:AT2G01790.1 | TAIR:AT2G01790.1 |
| Unigene:At.52591 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002083 |
| InterPro:IPR008974 | InterPro:MATH/TRAF_dom | RefSeq:NP_178288.1 | PFAM:PF00917 | PO:PO:0000084 | PFscan:PS50144 |
| PANTHER:PTHR24007 | PANTHER:PTHR24007:SF12 | UniProt:Q9ZUA7 | SMART:SM00061 | SUPFAM:SSF49599 | InterPro:TRAF-like |
| UniParc:UPI000009F036 | SEG:seg | : | : | : | : |
Description
MATH domain and coiled-coil domain-containing protein At2g01790 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA7]
Coordinates
chr2:-:341322..342480
Molecular Weight (calculated)
30516.4 Da
IEP (calculated)
4.841
GRAVY (calculated)
-0.203
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNHQAVKKL WVINNFSFLD SDRVYSDIFV VGGCKWCLLA LPEGNNNYIY DYFSLYLCVP DSEYLPSGWR RRAKVSFTMV NQVTGELSQQ QEGVYWFDEK
101: NTTQGFGSMF RLLVFQSSYK GFLVNGEVDI VAEVDVVEVI GKLDVSEESE SIDSNGFDVL ASQVESVNSL FGKYPCFASK LCPKTPRLKK NVVQSLNEIL
201: CKSTKELSNG DLAEAYSALR FVTKAGFKLD WLEKKLKETG KSRLQEIEED LKDLKVKCAD MDALLEFLR
101: NTTQGFGSMF RLLVFQSSYK GFLVNGEVDI VAEVDVVEVI GKLDVSEESE SIDSNGFDVL ASQVESVNSL FGKYPCFASK LCPKTPRLKK NVVQSLNEIL
201: CKSTKELSNG DLAEAYSALR FVTKAGFKLD WLEKKLKETG KSRLQEIEED LKDLKVKCAD MDALLEFLR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.