Factsheet for AT3G58380.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71960	Canola	cytosol	27.69	59.03
AT3G58370.1	Thale cress	cytosol	48.86	49.67
Bra007388.1-P	Field mustard	cytosol	45.28	45.72
CDY06045	Canola	cytosol	44.63	44.77
CDY06047	Canola	cytosol	46.58	43.87
Bra007386.1-P	Field mustard	cytosol	46.58	43.87
AT3G58360.1	Thale cress	cytosol	41.69	42.95
Bra007389.1-P	Field mustard	cytosol	44.63	42.95
AT2G05400.3	Thale cress	cytosol	29.32	41.47
AT3G58350.1	Thale cress	cytosol	39.74	40.53
AT1G31390.1	Thale cress	cytosol	35.18	40.3
AT3G58340.1	Thale cress	cytosol	42.35	40.0
AT3G58210.1	Thale cress	plastid	42.67	39.7
AT3G27040.1	Thale cress	cytosol	34.85	39.48
AT3G58200.1	Thale cress	cytosol	40.72	39.19
AT3G58250.1	Thale cress	cytosol	40.39	39.12
AT2G01790.1	Thale cress	cytosol	34.2	39.03
AT3G44790.1	Thale cress	cytosol	40.72	38.58
AT3G58410.1	Thale cress	cytosol	41.04	38.41
AT2G05420.1	Thale cress	cytosol	37.13	38.38
AT2G05410.2	Thale cress	cytosol	37.78	38.28
AT3G58400.1	Thale cress	extracellular	36.48	38.23
AT1G31380.1	Thale cress	cytosol	21.5	37.71
AT3G58260.1	Thale cress	cytosol, golgi, mitochondrion, plastid	39.41	37.69
AT3G44800.1	Thale cress	cytosol	41.04	36.84
AT1G31400.1	Thale cress	cytosol	32.57	35.97
AT3G29580.1	Thale cress	cytosol	35.83	35.95
AT3G58270.3	Thale cress	cytosol	39.09	34.99
AT1G31370.1	Thale cress	cytosol	21.82	34.72
AT3G58320.1	Thale cress	nucleus	24.76	33.93
AT3G58240.1	Thale cress	cytosol	34.53	33.44
AT3G44805.1	Thale cress	cytosol	24.76	30.65
Bra007387.1-P	Field mustard	cytosol	44.63	29.09
AT3G58220.2	Thale cress	cytosol	39.74	26.93
AT3G58430.1	Thale cress	cytosol	38.76	25.27
CDY06046	Canola	cytosol	46.91	24.96
AT3G58440.1	Thale cress	cytosol	36.48	18.64

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.1	EntrezGene:825007	ProteinID:AEE79775.1	EMBL:AK176427	ArrayExpress:AT3G58380
EnsemblPlantsGene:AT3G58380	RefSeq:AT3G58380	TAIR:AT3G58380	RefSeq:AT3G58380-TAIR-G	EnsemblPlants:AT3G58380.1	TAIR:AT3G58380.1
Unigene:At.34727	EMBL:BT010442	ProteinID:CAB68176.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0070481	GO:GO:0070966	GO:GO:0071025	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
RefSeq:NP_191397.1	PFscan:PS50144	PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	UniProt:Q9M2H8	SUPFAM:SSF49599
InterPro:TRAF-like	UniParc:UPI000009E50F	SEG:seg	:	:	:

Description

MATH domain and coiled-coil domain-containing protein At3g58380 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2H8]

Coordinates

chr3:-:21597799..21599608

Molecular Weight (calculated)

34920.3 Da

IEP (calculated)

5.858

GRAVY (calculated)

-0.172

Length

307 amino acids

Sequence
(BLAST)

001: MEKEVDKKFV WVIKDLNVFY PKQSHSDPFL IAGSRWRLLA LPKGTNYEFF YQYMGVADSC QSLTSSWRRH VKLRLTIVNG ISHKRSIVTD SDLYFDENLP
101: ACSYPTVPPP FNLLARDAGF LICREITIVI EVVSLEVIGT SNNDGANSID LLKQTQQIID VNGFQVLPSQ VESVKRIFEI YPNIASEVPS MKPCLKTLYM
201: NVLLGIIETL CQLPAELSDT DLDEASIAVL FVSQGGFKVD WLEKKLKEVK EKKKNVDNGK ARLQQIEEDL QKLNQKRLDL KDILDKEKAN DLTANVPLSF
301: NDVLKMF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.