Factsheet for Bra007387.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007388.1-P	Field mustard	cytosol	44.16	68.42
Bra007389.1-P	Field mustard	cytosol	44.59	65.83
Bra007386.1-P	Field mustard	cytosol	44.16	63.8
AT3G58370.1	Thale cress	cytosol	34.18	53.31
Bra003328.1-P	Field mustard	cytosol	14.01	47.83
Bra014573.1-P	Field mustard	cytosol, extracellular, plastid	10.62	47.62
Bra014574.1-P	Field mustard	cytosol	27.81	46.13
Bra014571.1-P	Field mustard	cytosol	18.68	46.07
AT3G58380.1	Thale cress	cytosol	29.09	44.63
Bra014088.1-P	Field mustard	cytosol	25.48	44.61
Bra014575.1-P	Field mustard	cytosol	27.6	43.62
Bra003329.1-P	Field mustard	cytosol	26.96	43.2
Bra014577.1-P	Field mustard	cytosol	24.63	42.34
Bra007390.1-P	Field mustard	cytosol	21.87	41.87
Bra012666.1-P	Field mustard	cytosol	23.35	40.44
Bra008697.1-P	Field mustard	plastid	14.65	38.33
Bra007392.1-P	Field mustard	cytosol	25.9	37.42
CDY06046	Canola	cytosol	44.59	36.4
Bra003331.1-P	Field mustard	cytosol	23.78	34.36
Bra014572.1-P	Field mustard	cytosol	29.09	30.58
Bra003330.1-P	Field mustard	cytosol	28.45	27.97
Bra003332.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	29.51	20.72
Bra003337.1-P	Field mustard	nucleus	21.66	17.62

Protein Annotations

EnsemblPlants:Bra007387.1	EnsemblPlants:Bra007387.1-P	EnsemblPlantsGene:Bra007387	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	ncoils:Coil
PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	PFAM:PF00917	PFscan:PS50144	SEG:seg	SMART:SM00061
SUPFAM:SSF49599	UniParc:UPI0002542DCF	UniProt:M4CT45	MapMan:35.1	:	:

Description

AT3G44790 (E=2e-050) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA09:-:28959459..28962120

Molecular Weight (calculated)

53446.1 Da

IEP (calculated)

4.941

GRAVY (calculated)

-0.135

Length

471 amino acids

Sequence
(BLAST)

001: MLPFAKLHDK DGGFLVNDEL KIVAELEALE VIGTLDESKD LLDKTSSSVN ERIDVNGFQV LPSQVESVRG IFERHPDLAE KFRAKNQHLR TACMNFLLSL
101: SEMLHKSLQE LSNEDLVEAD VALTYLKNAG FKCNHFTFPT LVLWCIGTYG FTSLCFRLWS LSLMVNKADD NKFTWVIKDF SSLQSFEICS DEFLIGGYKW
201: RLFAYPKGIE TDYLSLYLGV ETFEYLPLRW RRHAKFSLQV VNPIYEQSPI LRGSLLWTSI KMLPLVIVDS KDGGFLVNDE LKIVAEVDVL QVTVASDASE
301: RSQEAAYYVT GSSDLQKETR VGNETVDVNG FQVSTSQVAS VRCIFEKHPD FASKVLSNNQ HLKSTYMNVL LGLIETLCQL PEKLSDVDLS EASAAVVYLT
401: QVGFKMDWLE KKLQELKEKK KKMNTGKAQL QHMEEEFKIL NKKCLDLKDL LDKQNEDLSA ANVAFSFDDV V

Best Arabidopsis Sequence Match ( AT3G58270.1 )
(BLAST)

001: MGKEVDNKFT WVIKNFSSQQ SRKNYSDEFF VDGCKWRLLA FPKGNGVEKL SLYLAVAGSE FLPDGWRRHA YFHFSVVNQL SDELSQARET KNWFDASTSD
101: WGFTSMLSLK KLHDKDGGFL VNGELKIVVD VSVLEVIGKL DVPVESEETT TKALSELEEN DVPEESEETT KALSKVDEND GAESNDSLKE ASSVKESMDV
201: NGFRVLPSQV ETVSCIFERH PDIASEFGPK NQHLRSAYMN VLLSLIKTMC QSTQELSKDD LSDADAALAY LTDAGLNLNW LEEKLEEVSE KKENEEAGET
301: RVHEIEEELK ELKLKCSNLE AQLEKEKADV SVARAPFSFD DIV

Arabidopsis Description

MATH domain and coiled-coil domain-containing protein At3g58270 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2I9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.