Factsheet for Bra008029.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03642	Canola	mitochondrion	99.72	94.86
Bra041170.1-P	Field mustard	cytosol, mitochondrion	19.03	91.78
GSMUA_Achr11P...	Banana	cytosol	65.91	83.75
AT1G72340.2	Thale cress	cytosol, plastid	95.17	81.91
KRH47707	Soybean	cytosol	78.41	79.54
KRH69015	Soybean	cytosol	84.66	78.01
PGSC0003DMT400074245	Potato	cytosol	86.93	76.69
KRG97288	Soybean	extracellular	84.38	75.0
Bra039699.1-P	Field mustard	cytosol	81.53	74.93
TraesCS5D01G121400.1	Wheat	cytosol	76.99	74.86
TraesCS5A01G109200.2	Wheat	cytosol	76.7	74.59
Zm00001d041758_P001	Maize	cytoskeleton, cytosol, peroxisome	76.7	74.38
Solyc12g049580.1.1	Tomato	nucleus	86.36	74.33
OQU79155	Sorghum	cytosol	76.99	74.04
HORVU5Hr1G038720.1	Barley	cytosol	76.14	74.03
Os12t0497400-01	Rice	cytosol	78.41	72.63
GSMUA_Achr8P16800_001	Banana	mitochondrion, plastid	78.98	70.56
TraesCS5B01G113900.1	Wheat	cytosol	68.75	69.54
VIT_09s0002g00390.t01	Wine grape	mitochondrion, plastid	85.8	52.16
Bra040371.1-P	Field mustard	cytosol	20.45	18.23
Bra028196.1-P	Field mustard	nucleus	25.0	13.97
Bra014165.1-P	Field mustard	mitochondrion	24.15	12.94
Bra029637.1-P	Field mustard	cytosol	20.74	9.61

Protein Annotations

EnsemblPlants:Bra008029.1	EnsemblPlants:Bra008029.1-P	EnsemblPlantsGene:Bra008029	Gene3D:1.20.120.1070	Gene3D:3.40.50.10470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0044237	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	KEGG:00270+5.3.1.23
ncoils:Coil	PANTHER:PTHR10233	PANTHER:PTHR10233:SF18	PFAM:PF01008	SEG:seg	SUPFAM:SSF100950
UniParc:UPI0002546FF7	UniProt:M4CUY4	MapMan:17.4.1.2.3.1	:	:	:

Description

AT1G72340 (E=2e-174) | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein

Coordinates

chrA02:+:12651895..12653763

Molecular Weight (calculated)

38621.5 Da

IEP (calculated)

4.905

GRAVY (calculated)

0.043

Length

352 amino acids

Sequence
(BLAST)

001: MADTTQKPDA ISAYYQTRAA HHGVITSDWL AQAQAAVEQP DSSVSGLGPA KSFNVIDEFN GWRKQPDLAE AVAAIRAMAA VIRASEATTM MELEIELKKA
101: SDTLKSWDKT SISLTAGCDL FIRYVTRTSA LEYEDFNSAK SRLLERAEKF GEISCKARKI IAMLSQDFIF DGCTILVHGL SRVVLEVLKT AAQNNKLFRV
201: LCTEGRPDGT GVLLSNELSK LDIPVKLLLD SAVAYSMDEV DMVFVGADGV VESGGIINMM GTYQIALVAH SMNKPVYVAA ESYKFARLYP LDQKDMAPAL
301: RPIEFGVKIP AKVEVERSAR DYTPPQYLTL LFTDLGVLSP SVVSDELIQL YL

Best Arabidopsis Sequence Match ( AT1G72340.2 )
(BLAST)

001: MIFLEKATVY YLQFFHFEEF SQEKKKSMWR RSPSFILDER RSSNSPPMAD TTRGPFQNPD SISAYYQTRA AHHGVITSDW LAQAQAAVGG VSGDAQHDLS
101: VTDLGNEKSF NVIEEFNNWR KQPDLAEAVA AIRALAAVIR ASEASTMMEL EIELKKASDT LKSWDKTSIS LTAGCDLFIR YVTRTSALEY EDFNSAKSRL
201: LERAEKFGEI SCKARRIIAM LSQDFIFDGC TILVHGLSRV VLEILKTAAQ NNKLFRVLCT EGRPDGTGVL LSSELSKLDI PVKLLLDSAV AYSMDEVDMV
301: FVGADGVVES GGIINMMGTY QIALVAHSMN KPVYVAAESY KFARLYPLDQ KDMAPALRPI EFGVKIPTKV EVERSARDYT PPQYLTLLFT DLGVLSPSVV
401: SDELIQLYL

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT1G72340]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.