Factsheet for HORVU5Hr1G038720.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G109200.2	Wheat	cytosol	98.62	98.62
TraesCS5D01G121400.1	Wheat	cytosol	98.07	98.07
Zm00001d041758_P001	Maize	cytoskeleton, cytosol, peroxisome	93.92	93.66
OQU79155	Sorghum	cytosol	94.2	93.17
TraesCS5B01G113900.1	Wheat	cytosol	88.12	91.67
Os12t0497400-01	Rice	cytosol	96.13	91.58
GSMUA_Achr11P...	Banana	cytosol	65.75	85.92
Bra041170.1-P	Field mustard	cytosol, mitochondrion	16.57	82.19
Bra008029.1-P	Field mustard	cytosol	74.03	76.14
KRH47707	Soybean	cytosol	71.82	74.93
KRH69015	Soybean	cytosol	76.8	72.77
CDY03642	Canola	mitochondrion	74.31	72.7
CDX82154	Canola	mitochondrion	74.59	72.19
GSMUA_Achr8P16800_001	Banana	mitochondrion, plastid	77.07	70.81
CDX72907	Canola	cytosol	74.59	70.13
CDX96399	Canola	cytosol	74.59	69.95
KRG97288	Soybean	extracellular	76.24	69.7
AT1G53880.1	Thale cress	cytosol	74.03	69.61
PGSC0003DMT400074245	Potato	cytosol	75.97	68.92
Bra039699.1-P	Field mustard	cytosol	72.1	68.15
CDY36614	Canola	cytosol	72.65	68.13
CDY24066	Canola	cytosol	72.38	68.05
Solyc12g049580.1.1	Tomato	nucleus	75.14	66.5
AT1G72340.2	Thale cress	cytosol, plastid	74.03	65.53
VIT_09s0002g00390.t01	Wine grape	mitochondrion, plastid	76.24	47.67
AT1G53900.2	Thale cress	mitochondrion	74.03	44.37
HORVU1Hr1G035490.4	Barley	plastid	19.34	16.83
HORVU5Hr1G092900.2	Barley	mitochondrion	24.31	13.81

Protein Annotations

EMBL:AK358846	EnsemblPlants:HORVU5Hr1G038720.1	EnsemblPlantsGene:HORVU5Hr1G038720	Gene3D:1.20.120.1070	Gene3D:3.40.50.10470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0044237	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	KEGG:00270+5.3.1.23
ncoils:Coil	PANTHER:PTHR10233	PANTHER:PTHR10233:SF18	PFAM:PF01008	SEG:seg	SUPFAM:SSF100950
UniParc:UPI0002005C8B	UniProt:F2D4N6	MapMan:17.4.1.2.3.1	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D4N6]

Coordinates

chrchr5H:+:278481034..278507721

Molecular Weight (calculated)

39316.2 Da

IEP (calculated)

5.123

GRAVY (calculated)

0.003

Length

362 amino acids

Sequence
(BLAST)

001: MELDAAQNPN PAPPISAYYQ TRAEHHAVVS SDWLDHAAAA AAASLPDADA DAAPPPSPGS NGGGVIEEFN FWRRKPEAAE AVAAIMALAA VIRSSRATTM
101: MELEIELKKA SDKLKSWDAT SISLSAACDL FMRFVTRTSH LEHEKFDAAK SRLIERGEKF GEISLKARKT IAMLSQDFIS DGSTMLVHGY SRVVLEILKL
201: AASNRKLFRV LCTEGRPDRT GLRMSNELAA LGIPVKVLID SAVAYSMDEV DMVFVGADGV VESGGIINMM GTYQIALVAH SMNKPLYVAA ESYKFARLYP
301: LDQKDMTPAH RPIDFGVPIP AGVEVETSAR DYTPPQYLTL LLTDLGVLTP SVVSDELIQL YL

Best Arabidopsis Sequence Match ( AT1G53900.2 )
(BLAST)

001: MQIYSNNRTM RTKFSLNLIS PAKNMVKIHP DKAFPVDFSV GEGKTSPYLT TEKESFTIWM RSLVFHSKGC TVFDSKGNLI YRVDNYNSKS CSEVYLMDLY
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQLE TEIFEEFIKM WRESASFILD KHQNNKPISL THSIDSPPPP SASMADENPN PNPISAYYQT RAAHHGIVTS EWLEQAQAAV RRYPDRDSLV
301: SGRPFSVIED FNSWRQQPDL AEAVAAIRAL AAVIRASEAT TMMELEIELK KASDTLKSWD TTSISLTAGC DLFMRYVTRT SALEFEDFNS AKSRVLERAE
401: KFGEISCKAR TIIAMLSQDF IFDGCTILVH GFSRVVFEIL KTSAQNKKLF RVLCTEGRPD KTGVLLANEL AKLDIPVKLL IDSAVAYSMD EVDMVFVGAD
501: GVVESGGIIN MMGTYQIALV AQSMNKPVYV AAESYKFARL YPLDQKDLEP ALRPIDFSVP VPPKVEVERS ARDYTPPQYL TLLFTDLGVL TPSVVSDELI
601: QLYL

Arabidopsis Description

Eukaryotic translation initiation factor 2B (eIF-2B) family protein [Source:TAIR;Acc:AT1G53900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.