CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96399	Canola	cytosol	97.92	97.67
CDY03642	Canola	mitochondrion	92.99	96.76
CDX82154	Canola	mitochondrion	93.25	95.99
Bra041170.1-P	Field mustard	cytosol, mitochondrion	17.14	90.41
AT1G72340.2	Thale cress	cytosol, plastid	94.55	89.0
GSMUA_Achr11P...	Banana	cytosol	59.74	83.03
KRH69015	Soybean	cytosol	80.0	80.63
KRH47707	Soybean	cytosol	72.47	80.4
PGSC0003DMT400074245	Potato	cytosol	82.08	79.2
CDY36614	Canola	cytosol	79.22	79.02
CDY24066	Canola	cytosol	78.18	78.18
KRG97288	Soybean	extracellular	79.48	77.27
Solyc12g049580.1.1	Tomato	nucleus	81.82	77.02
TraesCS5D01G121400.1	Wheat	cytosol	70.91	75.41
TraesCS5A01G109200.2	Wheat	cytosol	70.65	75.14
Zm00001d041758_P001	Maize	cytoskeleton, cytosol, peroxisome	70.39	74.66
HORVU5Hr1G038720.1	Barley	cytosol	70.13	74.59
OQU79155	Sorghum	cytosol	70.65	74.32
GSMUA_Achr8P16800_001	Banana	mitochondrion, plastid	75.06	73.35
Os12t0497400-01	Rice	cytosol	71.95	72.89
TraesCS5B01G113900.1	Wheat	cytosol	64.16	70.98
VIT_09s0002g00390.t01	Wine grape	mitochondrion, plastid	81.82	54.4
CDY28065	Canola	cytosol	19.48	18.29
CDY08006	Canola	extracellular	3.64	16.47
CDY49077	Canola	cytosol, plastid	21.3	15.98
CDY01647	Canola	cytosol	24.16	14.79
CDX74513	Canola	nucleus	24.16	14.76
CDY34906	Canola	mitochondrion	17.66	14.72
CDY16477	Canola	mitochondrion	23.38	13.7
CDX77270	Canola	mitochondrion	23.38	13.7
CDY24631	Canola	cytosol	19.22	9.84
CDY27424	Canola	cytosol	3.12	9.84

Protein Annotations

KEGG:00270+5.3.1.23	Gene3D:1.20.120.1070	MapMan:17.4.1.2.3.1	Gene3D:3.40.50.10470	GO:A0A078C7Q7	EnsemblPlants:CDX72907
ProteinID:CDX72907	ProteinID:CDX72907.1	ncoils:Coil	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0044237	EnsemblPlantsGene:GSBRNA2T00103328001	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	PFAM:PF01008	PANTHER:PTHR10233
PANTHER:PTHR10233:SF18	MetaCyc:PWY-4361	MetaCyc:PWY-7174	SUPFAM:SSF100950	UniPathway:UPA00904	UniParc:UPI0004EB0133
SEG:seg	:	:	:	:	:

Description

BnaC06g33550D

Coordinates

chrLK031797:+:1079942..1081666

Molecular Weight (calculated)

42532.0 Da

IEP (calculated)

5.068

GRAVY (calculated)

-0.062

Length

385 amino acids

Sequence
(BLAST)

001: MWRRSASFIL DDERRRTSNS PPMADNTTRA PFQNPDAISA YYQTRAAHHG VITSDWLAQA QAAVGGVSGE EHPDSSVAEL GKEKTFNVIE EFNGWRKQPD
101: LAEAVAAIRA LAAVIRASEA STMMELEIEL KKASDTLKSW DKTSISLTAG CDLFIRYVTR TSALEYEDFN SAKSRLLERA EKFGEISCKA RKIIAMLSQD
201: FIFDGCTILV HGLSRVVLEI LKTAAQNNKL FRVLCTEGRP DGTGVLLSNE LSKLDIPVKL LLDSAVAYSM DEVDMVFVGA DGVVESGGII NMMGTYQIAL
301: VAHSMNKPVY VAAESYKFAR LYPLDQKDMA PALRPIEFGV KIPVKVEVER SARDYTPPQY LTLLFTDLGV LSPSVVSDEL IQLYL

Best Arabidopsis Sequence Match ( AT1G72340.2 )
(BLAST)

001: MIFLEKATVY YLQFFHFEEF SQEKKKSMWR RSPSFILDER RSSNSPPMAD TTRGPFQNPD SISAYYQTRA AHHGVITSDW LAQAQAAVGG VSGDAQHDLS
101: VTDLGNEKSF NVIEEFNNWR KQPDLAEAVA AIRALAAVIR ASEASTMMEL EIELKKASDT LKSWDKTSIS LTAGCDLFIR YVTRTSALEY EDFNSAKSRL
201: LERAEKFGEI SCKARRIIAM LSQDFIFDGC TILVHGLSRV VLEILKTAAQ NNKLFRVLCT EGRPDGTGVL LSSELSKLDI PVKLLLDSAV AYSMDEVDMV
301: FVGADGVVES GGIINMMGTY QIALVAHSMN KPVYVAAESY KFARLYPLDQ KDMAPALRPI EFGVKIPTKV EVERSARDYT PPQYLTLLFT DLGVLSPSVV
401: SDELIQLYL

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT1G72340]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.