CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G07300.3	Thale cress	cytosol	92.93	93.15
CDY08006	Canola	extracellular	17.07	82.35
VIT_13s0139g00250.t01	Wine grape	cytosol	81.22	79.86
KRH39206	Soybean	cytosol	79.76	78.8
KRH48472	Soybean	endoplasmic reticulum	79.27	78.31
GSMUA_Achr11P...	Banana	cytosol	58.29	75.16
KRH30036	Soybean	cytosol	75.61	74.7
CDY34906	Canola	mitochondrion	84.15	74.68
Solyc11g005600.1.1	Tomato	nucleus	74.39	74.03
KXG38620	Sorghum	cytosol	72.44	71.39
Zm00001d033046_P002	Maize	cytosol	71.46	70.43
PGSC0003DMT400044316	Potato	cytosol	70.24	69.4
TraesCS1B01G152300.1	Wheat	plastid	68.54	68.04
TraesCS1A01G138500.3	Wheat	plastid	68.54	67.87
TraesCS1D01G135300.2	Wheat	plastid	68.54	67.87
HORVU1Hr1G035490.4	Barley	plastid	68.54	67.55
Zm00001d014246_P004	Maize	cytosol	71.71	65.92
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	47.56	58.04
GSMUA_Achr11P...	Banana	cytosol	14.63	57.69
CDY24631	Canola	cytosol	95.37	51.99
CDY24066	Canola	cytosol	19.76	21.04
CDY36614	Canola	cytosol	19.51	20.73
CDY03642	Canola	mitochondrion	17.8	19.73
CDX72907	Canola	cytosol	18.29	19.48
CDX96399	Canola	cytosol	18.29	19.43
CDX82154	Canola	mitochondrion	17.56	19.25
CDY49077	Canola	cytosol, plastid	19.02	15.2
CDY01647	Canola	cytosol	20.0	13.04
CDX74513	Canola	nucleus	20.0	13.02
CDY16477	Canola	mitochondrion	19.02	11.87
CDX77270	Canola	mitochondrion	19.02	11.87
CDY27424	Canola	cytosol	1.22	4.1

Protein Annotations

KEGG:00270+5.3.1.23	MapMan:17.4.1.2.3.2	Gene3D:3.40.50.10470	GO:A0A078GNG2	UniProt:A0A078GNG2	EnsemblPlants:CDY28065
ProteinID:CDY28065	ProteinID:CDY28065.1	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0044237
EnsemblPlantsGene:GSBRNA2T00039007001	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	PFAM:PF01008	PANTHER:PTHR10233	PANTHER:PTHR10233:SF9
MetaCyc:PWY-4361	MetaCyc:PWY-7174	SUPFAM:SSF100950	UniPathway:UPA00904	UniParc:UPI0004EE9407	SEG:seg

Description

BnaC05g44670DBnaC05g44670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNG2]

Coordinates

chrLK032213:+:453203..455994

Molecular Weight (calculated)

43758.5 Da

IEP (calculated)

5.730

GRAVY (calculated)

0.086

Length

410 amino acids

Sequence
(BLAST)

001: MPDVQSTVLE FVNKLRKRKI EGSQSTAKCT VEILRSVISQ QRVPHSNQAS ALIDAVKAVG EQLVAANPVE LAVGNVVRRV LHIIREEDLS LATAAMAGLD
101: LLDASDDDGE DDNCRGVGYS AMSAAVAAAA ARSTLRPPSL QTLLEGTPES AAVPYTSSSG ADSESKTADK SSITRKLKHD VIEGVNHLIL EISGCHEQIA
201: EQAIEHIHQN EVILTLGSSR TVLEFLCAAK EKKRSFRVFV AEGAPRYQGH LLAKELVARG LQTTVITDSA VFAMISRVNM VIIGAHAVMA NGGVIGPVGV
301: NMAALAAKKH AVPFVVLAGS HKLCPLYPHN PEVLLNELRS PSELLDFGEV SDCLDFGAGS GSPLLQVVNP TFDYVPPSLV SLFITDTGGH NPSYMYRLIA
401: DYYSADDLVM

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.