CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014165.1-P	Field mustard	mitochondrion	99.39	99.39
CDX77270	Canola	mitochondrion	98.33	98.33
CDY27424	Canola	cytosol	17.05	91.8
AT1G48970.1	Thale cress	mitochondrion	84.93	83.78
Os03t0645200-01	Rice	cytosol, plastid	16.29	71.33
Zm00001d033223_P003	Maize	cytosol	24.66	69.53
VIT_14s0083g00170.t01	Wine grape	cytosol	50.53	67.48
CDY49077	Canola	cytosol, plastid	47.03	60.23
PGSC0003DMT400026040	Potato	cytosol	56.77	58.56
KRH01494	Soybean	nucleus	56.47	58.33
KRH18264	Soybean	cytosol	58.45	58.27
Solyc02g089810.2.1	Tomato	nucleus	56.32	58.08
KRG93828	Soybean	endoplasmic reticulum, nucleus	58.14	57.88
CDX74513	Canola	nucleus	54.95	57.3
CDY01647	Canola	cytosol	54.64	57.07
KXG24018	Sorghum	mitochondrion, plastid	51.6	56.78
GSMUA_Achr7P01240_001	Banana	cytosol	55.56	56.5
Zm00001d013692_P001	Maize	cytosol	52.05	56.16
GSMUA_Achr4P22890_001	Banana	cytosol	56.01	56.01
TraesCS5B01G376300.1	Wheat	mitochondrion	51.9	55.63
TraesCS5D01G384000.3	Wheat	mitochondrion	51.75	55.46
TraesCS5A01G374400.3	Wheat	mitochondrion	51.29	54.98
Zm00001d031081_P001	Maize	endoplasmic reticulum, vacuole	45.66	54.95
Os12t0617100-01	Rice	mitochondrion	50.38	54.53
HORVU5Hr1G092900.2	Barley	mitochondrion	51.6	53.22
EER91168	Sorghum	plastid	52.51	47.78
CDY36614	Canola	cytosol	14.16	24.09
CDX96399	Canola	cytosol	14.0	23.83
CDY03642	Canola	mitochondrion	13.24	23.51
CDY24066	Canola	cytosol	13.7	23.38
CDX72907	Canola	cytosol	13.7	23.38
CDX82154	Canola	mitochondrion	13.24	23.26
CDY28065	Canola	cytosol	11.87	19.02
CDY08006	Canola	extracellular	2.13	16.47
CDY34906	Canola	mitochondrion	10.81	15.37
CDY24631	Canola	cytosol	12.02	10.51

Protein Annotations

KEGG:00270+5.3.1.23	MapMan:17.4.1.2.3.4	Gene3D:3.40.50.10470	GO:A0A078FUG5	UniProt:A0A078FUG5	EnsemblPlants:CDY16477
ProteinID:CDY16477	ProteinID:CDY16477.1	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0044237
EnsemblPlantsGene:GSBRNA2T00091055001	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	PFAM:PF01008	PANTHER:PTHR10233	PANTHER:PTHR10233:SF28
MetaCyc:PWY-4361	MetaCyc:PWY-7174	SUPFAM:SSF100950	UniPathway:UPA00904	UniParc:UPI0004EED407	SEG:seg

Description

BnaA08g02900DBnaA08g02900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUG5]

Coordinates

chrLK032064:-:270604..273460

Molecular Weight (calculated)

72180.5 Da

IEP (calculated)

9.545

GRAVY (calculated)

-0.393

Length

657 amino acids

Sequence
(BLAST)

001: MDPRRGPLAV PKVRRVGFFT SIEPSPETPR PNRSLSGPAE AITSSSPLSD SPSGQFISPV QIPPSRHHSD NLASRAAPVP VPGPSAFRRQ LANDRALHVG
101: SYNPVDSLLG TSPPSSNGEV SEDSGSLFGF QRSDSAKLSA SFPNGGFDMT LRVRAPQESE AKVAIASTSD GRKKNVEASG EGESVAAKPL KEKETKSLKE
201: KTSKAERRAI QEAQRAAKAA AKGEGSKRAG ESSRPKPSKP AKQPQPKKEA PQATSSVSEK RAVSVEKERR MDVPQTQMQY DDKSRVDKAK RRSVVEQTES
301: KNKVELFLHL PQYERGNQLP NLSSNIFSLD TIHHAVYKVG LQHLAGDIAG DNARCIAMLH AFQEAINDYT TPPMKDLTMD LTAKINGYVS FLIECRPLSM
401: SMGNAIRFLK NQIRKLPVDL SEPEAKASLC SEIGRFIDEK ILLADKVIVQ HAVTKIRDGE VLLTYGFSCV VEMILLYAHE IGRKFRVVIV DSRPNLEGQK
501: LLRRLVTRGL DCTYTHINAV SYIMGEVTRV FLGASSIFSN GTLYSKVGTA CVAMVANAFS VPVIVCCEAY KFHERVLLDS ICSNELGDPD AIANVPLRNN
601: KKHSKTMDNN KNLQFLNLMY DSTPAEYISM IVTDYGMIPP TSIPVIVREY RREDLLL

Best Arabidopsis Sequence Match ( AT1G48970.1 )
(BLAST)

001: MDTRRGALAV PKVRRVGFFT SIEPPPESSL QRPNRSQSGP VDATTSSSPL SDSPSGNLIS PVLIPPSRHH SDNLTSRVAA AAAAPVPVPG PAAFRRYLTP
101: ERTLLHVGSY NPPDSLLGTS SPSSNGGLSE DSASLFGFQR SDSTKLSASL PNGGFDLTLA VRAPQESETK IATTSASQGK KKIAEVSGKS ESATTKPQKE
201: KEPKALKDKT TKAERRAIQE AQRAAKAAAK GEGSRRADES GRANPGKAAI KPQPKKERLP VTSSVSEKTA VAVEKEKRMD VPQTQMQYDD KSRVDKAKRR
301: AVVEQTESKN KVELFLHLPQ YERSNQLPNL SSNFFTLDSI HHAVYKVGLQ HLAGDISGDN ARCIAMLQAF QEAIEDYSTP PMKDLTMDLT AKINGYVSFL
401: IECRPLSMSM GNAIRFLKNQ IRKLPVNLSE SEAKSSLCSD IGRFIDEKTI IADKAIVQHA VTKIRDGEVL LTYGFSCVVE MILLYAHEIG KKFRVVIVDS
501: RPNLEGQKLL RRLVTRGLDC TYTHINAISY IMREATRVFL GASSIYSNGT LYARVGTSCI AMVANAFSVP VIVCCEAYKF HERVLLDSIC SNELGDPDAV
601: ANIPSFRTNA KHSKTMDNNK NLQFLNLMYD STPSEYISMI VSDYGMIPPT SIPVIVREYR RENLLL

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I048]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.