CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77270	Canola	mitochondrion	92.62	17.2
Bra014165.1-P	Field mustard	mitochondrion	91.8	17.05
CDY16477	Canola	mitochondrion	91.8	17.05
AT1G48970.1	Thale cress	mitochondrion	86.89	15.92
VIT_14s0083g00170.t01	Wine grape	cytosol	63.93	15.85
CDY49077	Canola	cytosol, plastid	61.48	14.62
Zm00001d033223_P003	Maize	cytosol	27.87	14.59
Zm00001d031081_P001	Maize	endoplasmic reticulum, vacuole	60.66	13.55
KXG24018	Sorghum	mitochondrion, plastid	61.48	12.56
KRH01494	Soybean	nucleus	64.75	12.42
PGSC0003DMT400026040	Potato	cytosol	64.75	12.4
Solyc02g089810.2.1	Tomato	nucleus	63.93	12.24
CDY01647	Canola	cytosol	63.11	12.24
CDX74513	Canola	nucleus	63.11	12.22
KRG93828	Soybean	endoplasmic reticulum, nucleus	63.93	11.82
KRH18264	Soybean	cytosol	63.11	11.68
GSMUA_Achr7P01240_001	Banana	cytosol	60.66	11.46
TraesCS5D01G384000.3	Wheat	mitochondrion	57.38	11.42
TraesCS5B01G376300.1	Wheat	mitochondrion	57.38	11.42
TraesCS5A01G374400.3	Wheat	mitochondrion	57.38	11.42
GSMUA_Achr4P22890_001	Banana	cytosol	61.48	11.42
Os12t0617100-01	Rice	mitochondrion	55.74	11.2
HORVU5Hr1G092900.2	Barley	mitochondrion	57.38	10.99
Zm00001d013692_P001	Maize	cytosol	54.1	10.84
EER91168	Sorghum	plastid	54.1	9.14
CDY24066	Canola	cytosol	11.48	3.64
CDY36614	Canola	cytosol	11.48	3.63
CDX96399	Canola	cytosol	10.66	3.37
CDY03642	Canola	mitochondrion	9.84	3.24
CDX72907	Canola	cytosol	9.84	3.12
CDX82154	Canola	mitochondrion	9.02	2.94
CDY28065	Canola	cytosol	4.1	1.22
CDY24631	Canola	cytosol	4.92	0.8
CDY34906	Canola	mitochondrion	2.46	0.65
Os03t0645200-01	Rice	cytosol, plastid	0.0	0.0
CDY08006	Canola	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:CDY27424	EnsemblPlantsGene:GSBRNA2T00037396001	PANTHER:PTHR10233	PANTHER:PTHR10233:SF28	ProteinID:CDY27424	ProteinID:CDY27424.1
UniParc:UPI0004EE34CD	UniProt:A0A078GQD7	MapMan:35.2	:	:	:

Description

BnaC03g64640DBnaC03g64640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQD7]

Coordinates

chrLK032204:+:177463..177914

Molecular Weight (calculated)

14001.8 Da

IEP (calculated)

8.464

GRAVY (calculated)

-0.602

Length

122 amino acids

Sequence
(BLAST)

001: MDVPQAQMQY DDKSRVDKAK RRSVVEQTES KNKVELFLHL PQYERGNQLP NLSSNIFTLD TIHQAVYKVG LQHLAGDIAG DNARCIAMLH AFQEAINNYT
101: TPPMKDLTMD LTEKFNAKKF KF

Best Arabidopsis Sequence Match ( AT1G48970.1 )
(BLAST)

001: MDTRRGALAV PKVRRVGFFT SIEPPPESSL QRPNRSQSGP VDATTSSSPL SDSPSGNLIS PVLIPPSRHH SDNLTSRVAA AAAAPVPVPG PAAFRRYLTP
101: ERTLLHVGSY NPPDSLLGTS SPSSNGGLSE DSASLFGFQR SDSTKLSASL PNGGFDLTLA VRAPQESETK IATTSASQGK KKIAEVSGKS ESATTKPQKE
201: KEPKALKDKT TKAERRAIQE AQRAAKAAAK GEGSRRADES GRANPGKAAI KPQPKKERLP VTSSVSEKTA VAVEKEKRMD VPQTQMQYDD KSRVDKAKRR
301: AVVEQTESKN KVELFLHLPQ YERSNQLPNL SSNFFTLDSI HHAVYKVGLQ HLAGDISGDN ARCIAMLQAF QEAIEDYSTP PMKDLTMDLT AKINGYVSFL
401: IECRPLSMSM GNAIRFLKNQ IRKLPVNLSE SEAKSSLCSD IGRFIDEKTI IADKAIVQHA VTKIRDGEVL LTYGFSCVVE MILLYAHEIG KKFRVVIVDS
501: RPNLEGQKLL RRLVTRGLDC TYTHINAISY IMREATRVFL GASSIYSNGT LYARVGTSCI AMVANAFSVP VIVCCEAYKF HERVLLDSIC SNELGDPDAV
601: ANIPSFRTNA KHSKTMDNNK NLQFLNLMYD STPSEYISMI VSDYGMIPPT SIPVIVREYR RENLLL

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I048]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.