CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029637.1-P	Field mustard	cytosol	100.0	98.95
CDY28065	Canola	cytosol	51.99	95.37
AT3G07300.3	Thale cress	cytosol	49.87	91.69
CDY08006	Canola	extracellular	9.44	83.53
VIT_13s0139g00250.t01	Wine grape	cytosol	43.62	78.66
KRH39206	Soybean	cytosol	42.69	77.35
KRH48472	Soybean	endoplasmic reticulum	42.42	76.87
GSMUA_Achr11P...	Banana	cytosol	32.05	75.79
CDY34906	Canola	mitochondrion	46.01	74.89
KRH30036	Soybean	cytosol	41.09	74.46
Solyc11g005600.1.1	Tomato	nucleus	40.16	73.3
KXG38620	Sorghum	cytosol	38.96	70.43
Zm00001d033046_P002	Maize	cytosol	38.43	69.47
PGSC0003DMT400044316	Potato	cytosol	37.5	67.95
TraesCS1A01G138500.3	Wheat	plastid	36.97	67.15
TraesCS1B01G152300.1	Wheat	plastid	36.84	67.07
TraesCS1D01G135300.2	Wheat	plastid	36.84	66.91
HORVU1Hr1G035490.4	Barley	plastid	36.84	66.59
Zm00001d014246_P004	Maize	cytosol	38.56	65.02
GSMUA_Achr11P...	Banana	cytosol	8.38	60.58
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	25.13	56.25
CDY24066	Canola	cytosol	10.64	20.78
CDY36614	Canola	cytosol	10.51	20.47
CDY03642	Canola	mitochondrion	9.57	19.46
CDX72907	Canola	cytosol	9.84	19.22
CDX96399	Canola	cytosol	9.84	19.17
CDX82154	Canola	mitochondrion	9.44	18.98
CDY49077	Canola	cytosol, plastid	10.24	15.01
CDY01647	Canola	cytosol	10.77	12.88
CDX74513	Canola	nucleus	10.77	12.86
CDX77270	Canola	mitochondrion	10.51	12.02
CDY16477	Canola	mitochondrion	10.51	12.02
CDY27424	Canola	cytosol	0.8	4.92

Protein Annotations

KEGG:00270+5.3.1.23	MapMan:17.4.1.2.3.2	Gene3D:3.40.50.10470	GO:A0A078GGZ4	UniProt:A0A078GGZ4	EnsemblPlants:CDY24631
ProteinID:CDY24631	ProteinID:CDY24631.1	InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0044237	EnsemblPlantsGene:GSBRNA2T00027002001	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IF-2B-related	InterPro:IPR001810	InterPro:NagB/RpiA_transferase-like
PFAM:PF00646	PFAM:PF01008	PFAM:PF08268	PANTHER:PTHR10233	PANTHER:PTHR10233:SF9	MetaCyc:PWY-4361
MetaCyc:PWY-7174	SMART:SM00256	SUPFAM:SSF100950	SUPFAM:SSF50965	SUPFAM:SSF81383	TIGRFAMs:TIGR01640
UniPathway:UPA00904	UniParc:UPI0004EE657B	SEG:seg	:	:	:

Description

BnaA05g30300DBnaA05g30300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGZ4]

Coordinates

chrLK032162:+:16518..20581

Molecular Weight (calculated)

82881.9 Da

IEP (calculated)

7.995

GRAVY (calculated)

0.017

Length

752 amino acids

Sequence
(BLAST)

001: MPDVQSTVLE FVNKLRKRKI EGSQATAKCT VELLRSVISQ QRVPHSNQAL ALIDAVKAVG EQLVAANPVE LAVGNVVRRD LSLATAAMAG LDLLDGSDDD
101: GEDDNCKGVG YSAMSAAVAA AAARSTLRPP SLQTLLEGTP ESAAVPYTSS SGADSESKTA DKSSITRKLK HDVIEGVNQL ILEIAGCHEQ IAEQAIEHIH
201: QNEVILTLGS SRTVLEFLCA AKEKKRSFRV FVAEGAPRYQ GHLLAKELVA RGLQTTVITD SAVFAMISRV NMVIIGAHAV MANGGVIGPV GVNMAALAAK
301: KHAVPFVVLA GSHKLCPLYP HNPEVLLNEL RSPSELLDFG EFSDCLDFGT GSGSPLLQVV NPTFDYVPPS LVSLFITDTG GHNPSYMYRL IADYYSADDL
401: IEILSRLPSK SLVRFMLVSK SWQEIISSKS FIRLRSLTWP LRFLLVLKEF DYQKGRLTFN FFSSSSLSLS STSISTTFLS KITFPLRQAG HPIYYVNGLI
501: NIGDIICNPC TGKTVSLPKL AASGGSIGRR FFGYDPVNNQ YKVLCITHHN LGGHATLQFN RYHVFTLGAK PKKWRFIDCG IPHTDWSSCL CIDGFVYYIA
601: STDAGLMCLM KFDLSSEKLN IFARASEEMK ASFSHFNSYK TLINYHGKVA IAIQRSHLVP SIDLFVFEEG KQEYKAKSFN NLPRLNLRTK CVINHMDDTI
701: FAPVYSESEA TIIHHDFKGH SFKKMKFEVD VKKDWFHETN YFVGYVESLM MI

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.