Factsheet for Bra029637.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24631	Canola	cytosol	98.95	100.0
Bra040371.1-P	Field mustard	cytosol	49.34	94.94
AT3G07300.3	Thale cress	cytosol	50.39	93.64
VIT_13s0139g00250.t01	Wine grape	cytosol	44.21	80.58
KRH39206	Soybean	cytosol	43.29	79.28
KRH48472	Soybean	endoplasmic reticulum	43.03	78.8
KRH30036	Soybean	cytosol	41.71	76.39
GSMUA_Achr11P...	Banana	cytosol	31.71	75.79
Solyc11g005600.1.1	Tomato	nucleus	40.66	75.0
KXG38620	Sorghum	cytosol	39.47	72.12
Zm00001d033046_P002	Maize	cytosol	38.95	71.15
PGSC0003DMT400044316	Potato	cytosol	38.16	69.88
TraesCS1A01G138500.3	Wheat	plastid	37.5	68.84
TraesCS1B01G152300.1	Wheat	plastid	37.37	68.77
TraesCS1D01G135300.2	Wheat	plastid	37.37	68.6
HORVU1Hr1G035490.4	Barley	plastid	37.37	68.27
Zm00001d014246_P004	Maize	cytosol	39.08	66.59
GSMUA_Achr11P...	Banana	cytosol	8.29	60.58
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	25.79	58.33
Bra041170.1-P	Field mustard	cytosol, mitochondrion	2.37	24.66
Bra039699.1-P	Field mustard	cytosol	10.66	21.15
Bra008029.1-P	Field mustard	cytosol	9.61	20.74
Bra028196.1-P	Field mustard	nucleus	10.92	13.17
Bra014165.1-P	Field mustard	mitochondrion	10.53	12.18

Protein Annotations

KEGG:00270+5.3.1.23	MapMan:17.4.1.2.3.2	Gene3D:3.40.50.10470	EnsemblPlantsGene:Bra029637	EnsemblPlants:Bra029637.1	EnsemblPlants:Bra029637.1-P
InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0044237	InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IF-2B-related	InterPro:IPR001810	UniProt:M4ELG9	InterPro:NagB/RpiA_transferase-like	PFAM:PF00646	PFAM:PF01008
PFAM:PF08268	PANTHER:PTHR10233	PANTHER:PTHR10233:SF9	SMART:SM00256	SUPFAM:SSF100950	SUPFAM:SSF50965
SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI0002547FB0	SEG:seg	:	:

Description

AT3G07300 (E=7e-200) | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein

Coordinates

chrA05:+:22867609..22871461

Molecular Weight (calculated)

83872.2 Da

IEP (calculated)

7.879

GRAVY (calculated)

0.020

Length

760 amino acids

Sequence
(BLAST)

001: MPDVQSTVLE FVNKLRKRKI EGSQATAKCT VELLRSVISQ QRVPHSNQAL ALIDAVKAVG EQLVAANPVE LAVGNVVRRV LHIIREEDLS LATAAMAGLD
101: LLDGSDDDGE DDNCKGVGYS AMSAAVAAAA ARSTLRPPSL QTLLEGTPES AAVPYTSSSG ADSESKTADK SSITRKLKHD VIEGVNQLIL EIAGCHEQIA
201: EQAIEHIHQN EVILTLGSSR TVLEFLCAAK EKKRSFRVFV AEGAPRYQGH LLAKELVARG LQTTVITDSA VFAMISRVNM VIIGAHAVMA NGGVIGPVGV
301: NMAALAAKKH AVPFVVLAGS HKLCPLYPHN PEVLLNELRS PSELLDFGEF SDCLDFGTGS GSPLLQVVNP TFDYVPPSLV SLFITDTGGH NPSYMYRLIA
401: DYYSADDLIE ILSRLPSKSL VRFMLVSKSW QEIISSKSFI RLRSLTWPLR FLLVLKEFDY QKGRLTFNFF SSSSLSLSST SISTTFLSKI TFPLRQAGHP
501: IYYVNGLINI GDIICNPCTG KTVSLPKLAA SGGSIGRRFF GYDPVNNQYK VLCITHHNLG GHATLQFNRY HVFTLGAKPK KWRFIDCGIP HTDWSSCLCI
601: DGFVYYIAST DAGLMCLMKF DLSSEKLNIF ARASEEMKAS FSHFNSYKTL INYHGKVAIA IQRSHLVPSI DLFVFEEGKQ EYKAKSFNNL PRLNLRTKCV
701: INHMDDTIFA PVYSESEATI IHHDFKGHSF KKMKFEVDVK KDWFHETNYF VGYVESLMMI

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.