CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033046_P002	Maize	cytosol	98.08	98.08
Zm00001d014246_P004	Maize	cytosol	99.04	92.38
TraesCS1A01G138500.3	Wheat	plastid	89.9	90.34
TraesCS1B01G152300.1	Wheat	plastid	89.66	90.31
TraesCS1D01G135300.2	Wheat	plastid	89.66	90.1
HORVU1Hr1G035490.4	Barley	plastid	89.9	89.9
GSMUA_Achr11P...	Banana	cytosol	61.06	79.87
VIT_13s0139g00250.t01	Wine grape	cytosol	77.4	77.22
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	61.78	76.49
KRH39206	Soybean	cytosol	74.76	74.94
Bra040371.1-P	Field mustard	cytosol	70.43	74.18
AT3G07300.3	Thale cress	cytosol	72.84	74.08
KRH48472	Soybean	endoplasmic reticulum	73.8	73.98
CDY28065	Canola	cytosol	71.39	72.44
Solyc11g005600.1.1	Tomato	nucleus	71.63	72.33
KRH30036	Soybean	cytosol	70.67	70.84
CDY08006	Canola	extracellular	14.18	69.41
Solyc09g090400.2.1	Tomato	cytosol, plastid	61.78	66.75
PGSC0003DMT400044316	Potato	cytosol	66.11	66.27
GSMUA_Achr11P...	Banana	cytosol	15.87	63.46
CDY34906	Canola	mitochondrion	65.14	58.66
Bra029637.1-P	Field mustard	cytosol	72.12	39.47
CDY24631	Canola	cytosol	70.43	38.96
OQU79155	Sorghum	cytosol	16.83	19.13
KXG24018	Sorghum	mitochondrion, plastid	20.19	14.07
EER91168	Sorghum	plastid	20.43	11.77

Protein Annotations

EnsemblPlants:KXG38620	EnsemblPlantsGene:SORBI_3001G259000	Gene3D:3.40.50.10470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0044237	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	KEGG:00270+5.3.1.23	MetaCyc:PWY-4361	MetaCyc:PWY-7174
PANTHER:PTHR10233	PANTHER:PTHR10233:SF9	PFAM:PF01008	ProteinID:KXG38620	ProteinID:KXG38620.1	ProteinID:KXG38622.1
SEG:seg	SUPFAM:SSF100950	UniParc:UPI0001C80A3A	UniProt:A0A1B6QL23	MapMan:17.4.1.2.3.2	:

Description

hypothetical protein

Coordinates

chr1:+:31003967..31011085

Molecular Weight (calculated)

44886.7 Da

IEP (calculated)

6.195

GRAVY (calculated)

-0.004

Length

416 amino acids

Sequence
(BLAST)

001: MPDVQPLVSD FVLKLKRRKV EGSHAVARQT AELLRSVVSQ HRMVSSANQA AALADAVRAV GEQLIAANPV ELAVGNIVRR VLHIIKEEDI SSTAVGIEGL
101: SVTVDSDDEY DSEHDDRPAL SAAVLAAHAR NALRAPSLQT LLEDIPVSPA VSRTASSTGD SDGKSKSAGD KSSTRKLKHD VIAAIGDLID EIDSCYEPIS
201: EQAVELIHQN EVILTLGRSR TVKEFLYAAK EKKRSFRVFV AEGAPRYQGH VLAKELVEKG VQTTVITDSA VFAMISRVNM VIVGAHAIMA NGGVIAPVGM
301: NMVALAAQRH AVPFVVVAGS HKLCPLYPHN PEVLLNELKS PSDLLDFGEF SDCMNFSTQD GSPLLNVVNP TFDYVPPKLV SLFITDTGGH SPSYMYRLIA
401: EYYSADDLVV RRKATS

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.