Factsheet for Zm00001d014246_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38620	Sorghum	cytosol	92.38	99.04
Zm00001d033046_P002	Maize	cytosol	91.93	98.56
TraesCS1A01G138500.3	Wheat	plastid	84.08	90.58
TraesCS1D01G135300.2	Wheat	plastid	83.86	90.34
TraesCS1B01G152300.1	Wheat	plastid	83.63	90.31
HORVU1Hr1G035490.4	Barley	plastid	84.08	90.14
GSMUA_Achr11P...	Banana	cytosol	56.95	79.87
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	58.3	77.38
VIT_13s0139g00250.t01	Wine grape	cytosol	71.52	76.5
KRH39206	Soybean	cytosol	69.28	74.46
KRH48472	Soybean	endoplasmic reticulum	69.28	74.46
Bra040371.1-P	Field mustard	cytosol	65.25	73.67
AT3G07300.3	Thale cress	cytosol	67.26	73.35
CDY28065	Canola	cytosol	65.92	71.71
Solyc11g005600.1.1	Tomato	nucleus	66.14	71.6
KRH30036	Soybean	cytosol	65.92	70.84
CDY08006	Canola	extracellular	13.23	69.41
Solyc09g090400.2.1	Tomato	cytosol, plastid	57.4	66.49
PGSC0003DMT400044316	Potato	cytosol	61.44	66.02
GSMUA_Achr11P...	Banana	cytosol	15.02	64.42
CDY34906	Canola	mitochondrion	60.31	58.23
Bra029637.1-P	Field mustard	cytosol	66.59	39.08
CDY24631	Canola	cytosol	65.02	38.56
Zm00001d033223_P003	Maize	cytosol	12.56	24.03
Zm00001d041758_P001	Maize	cytoskeleton, cytosol, peroxisome	15.92	19.56
Zm00001d013692_P001	Maize	cytosol	19.28	14.12
Zm00001d031081_P001	Maize	endoplasmic reticulum, vacuole	15.92	13.0

Protein Annotations

KEGG:00270+5.3.1.23	EntrezGene:100283019	MapMan:17.4.1.2.3.2	Gene3D:3.40.50.10470	UniProt:A0A1D6GR68	ProteinID:AQK65608.1
ProteinID:AQK65614.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0044237	InterPro:IF-2B-related
InterPro:NagB/RpiA_transferase-like	PFAM:PF01008	PANTHER:PTHR10233	PANTHER:PTHR10233:SF9	SUPFAM:SSF100950	UniParc:UPI000845296F
EnsemblPlantsGene:Zm00001d014246	EnsemblPlants:Zm00001d014246_P004	EnsemblPlants:Zm00001d014246_T004	SEG:seg	:	:

Description

NagB/RpiA/CoA transferase-like superfamily protein

Coordinates

chr5:+:37903653..37920004

Molecular Weight (calculated)

48458.3 Da

IEP (calculated)

6.751

GRAVY (calculated)

0.005

Length

446 amino acids

Sequence
(BLAST)

001: MPDVQPLVSD FVLKLKRRKV EGSHAVARQT AELLRSVVSQ HRMGSSANQA ATLADAVRAV GEQLIAANPI ELAVGNIVRR VLHIIKEEDI SSTAVGIEGL
101: SVTVDSDDEY DSEHDDRPAL SAAVLAAHAR NALRAPSLQT LLEDIPVSPA ISRTASSTGD SDGKSKSAGD KSSTRKLKHD VIAAIGDLID EIDSCYEPIS
201: EQAVELIHQN EVILTLGRSR TVKEFLYAAK EKKRSFRVFV AEGAPRYQGH VLAKELVEKG VQTTVITDSA VFAMISRVNM VIVGAHAIMA NGGVIAPVGM
301: NMVALAAQRH AVPFVVVAGS HKVDFCTLPR KICNLSSRIR IRFPFCLLPH VQLCPLYPHN PEVLLNELKS PSDLLDFGEF SDCMNFSTQD GSPLLNVVNP
401: TFDYVPPKLV SLFITDTGGH SPSYMYRLIA EYYSADDLVV RRKATS

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.