Factsheet for Os10t0392700-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G138500.3	Wheat	plastid	76.79	62.32
TraesCS1B01G152300.1	Wheat	plastid	76.19	61.99
TraesCS1D01G135300.2	Wheat	plastid	76.19	61.84
KXG38620	Sorghum	cytosol	76.49	61.78
HORVU1Hr1G035490.4	Barley	plastid	76.49	61.78
Zm00001d033046_P002	Maize	cytosol	75.89	61.3
Zm00001d014246_P004	Maize	cytosol	77.38	58.3
GSMUA_Achr11P...	Banana	cytosol	53.27	56.29
VIT_13s0139g00250.t01	Wine grape	cytosol	64.58	52.04
Solyc11g005600.1.1	Tomato	nucleus	62.5	50.97
KRH39206	Soybean	cytosol	61.31	49.64
KRH48472	Soybean	endoplasmic reticulum	61.31	49.64
AT3G07300.3	Thale cress	cytosol	58.93	48.41
Solyc09g090400.2.1	Tomato	cytosol, plastid	55.36	48.31
CDY28065	Canola	cytosol	58.04	47.56
Bra040371.1-P	Field mustard	cytosol	55.65	47.34
KRH30036	Soybean	cytosol	57.44	46.51
PGSC0003DMT400044316	Potato	cytosol	56.55	45.78
CDY34906	Canola	mitochondrion	56.25	40.91
Bra029637.1-P	Field mustard	cytosol	58.33	25.79
CDY24631	Canola	cytosol	56.25	25.13
CDY08006	Canola	extracellular	5.65	22.35
GSMUA_Achr11P...	Banana	cytosol	5.65	18.27
Os03t0645200-01	Rice	cytosol, plastid	6.25	14.0
Os12t0497400-01	Rice	cytosol	15.77	13.95
Os12t0617100-01	Rice	mitochondrion	15.77	8.73

Protein Annotations

KEGG:00270+5.3.1.23	MapMan:17.4.1.2.3.2	Gene3D:3.40.50.10470	UniProt:A0A0P0XUJ0	ProteinID:BAT10681.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0044237	InterPro:IF-2B-related
InterPro:NagB/RpiA_transferase-like	EnsemblPlantsGene:Os10g0392700	EnsemblPlants:Os10t0392700-02	PFAM:PF01008	PANTHER:PTHR10233	PANTHER:PTHR10233:SF9
SUPFAM:SSF100950	UniParc:UPI00039396A0	SEG:seg	:	:	:

Description

Similar to Initiation factor 2 subunit family protein, expressed. (Os10t0392700-01);Similar to Initiation factor 2 subunit family protein, expressed. (Os10t0392700-02)

Coordinates

chr10:-:13091133..13096726

Molecular Weight (calculated)

35594.7 Da

IEP (calculated)

7.650

GRAVY (calculated)

-0.014

Length

336 amino acids

Sequence
(BLAST)

001: VKFPHCCRQH ISLVPLLLSE NPNPSPPIRP SSAAGRHAGR AAARQRVRPQ AQAPQGGGVP CRGAADGVGE QLIAANPIEL AVGNIVRRVL HIIKEEDISS
101: TAVGIEGLSV TAESDDEYDS GNDDHPTLSA AVLAAHARNA LRAPSLQTLL EDIPVSTALS RSASSAGDSD GKSGDKSSKS RKLKHDVIAA IGDLIDEIDT
201: CYDQISEQAV EHIHQNEVIL TLGRSRTVKE FLYAAKEKKR SFRVFVAEGA PRYKGHVLAK ELVEKGVQTT VITDSAVFAM ISRVNMVIVG AHAIMANGGV
301: IAPVGMNMVA LAAQRHAVPF VVVAGSHKVD FCILCI

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.