CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040371.1-P	Field mustard	cytosol	75.97	88.86
CDY28065	Canola	cytosol	74.68	84.15
CDY08006	Canola	extracellular	15.37	83.53
AT3G07300.3	Thale cress	cytosol	73.38	82.89
GSMUA_Achr11P...	Banana	cytosol	52.6	76.42
VIT_13s0139g00250.t01	Wine grape	cytosol	65.15	72.18
KRH48472	Soybean	endoplasmic reticulum	62.55	69.64
KRH39206	Soybean	cytosol	62.55	69.64
Solyc11g005600.1.1	Tomato	nucleus	61.47	68.93
KRH30036	Soybean	cytosol	59.96	66.75
KXG38620	Sorghum	cytosol	58.66	65.14
Zm00001d033046_P002	Maize	cytosol	57.79	64.18
PGSC0003DMT400044316	Potato	cytosol	57.36	63.86
TraesCS1B01G152300.1	Wheat	plastid	55.84	62.47
TraesCS1D01G135300.2	Wheat	plastid	55.84	62.32
TraesCS1A01G138500.3	Wheat	plastid	55.84	62.32
HORVU1Hr1G035490.4	Barley	plastid	55.84	62.02
Zm00001d014246_P004	Maize	cytosol	58.23	60.31
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	40.91	56.25
CDY24631	Canola	cytosol	74.89	46.01
GSMUA_Achr11P...	Banana	cytosol	7.14	31.73
CDY24066	Canola	cytosol	16.02	19.22
CDY36614	Canola	cytosol	16.02	19.17
CDY03642	Canola	mitochondrion	14.72	18.38
CDX82154	Canola	mitochondrion	14.5	17.91
CDX72907	Canola	cytosol	14.72	17.66
CDX96399	Canola	cytosol	14.72	17.62
CDY49077	Canola	cytosol, plastid	15.37	13.84
CDY01647	Canola	cytosol	16.23	11.92
CDX74513	Canola	nucleus	16.23	11.9
CDX77270	Canola	mitochondrion	15.37	10.81
CDY16477	Canola	mitochondrion	15.37	10.81
CDY27424	Canola	cytosol	0.65	2.46

Protein Annotations

KEGG:00270+5.3.1.23	MapMan:17.4.1.2.3.2	Gene3D:3.40.50.10470	GO:A0A078HB15	UniProt:A0A078HB15	EnsemblPlants:CDY34906
ProteinID:CDY34906	ProteinID:CDY34906.1	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0044237
EnsemblPlantsGene:GSBRNA2T00057478001	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	PFAM:PF01008	PANTHER:PTHR10233	PANTHER:PTHR10233:SF9
MetaCyc:PWY-4361	MetaCyc:PWY-7174	SUPFAM:SSF100950	UniPathway:UPA00904	UniParc:UPI0004EDE5F6	SEG:seg

Description

BnaA01g32370DBnaA01g32370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HB15]

Coordinates

chrLK032343:+:30045..33250

Molecular Weight (calculated)

49946.9 Da

IEP (calculated)

7.658

GRAVY (calculated)

0.026

Length

462 amino acids

Sequence
(BLAST)

001: MIGTKQNIRA GTYKYSIYTK EFFLERLSYW AFVSAAQTLR PIKPPASHYL VFLFNSVSLS PEYSLSTSSP HRSPPSHSHR VKVRCRTCNR WCLSLLTSSG
101: NVRLRAHKLQ RDAPWSFLAV GGQLVAANPV ELAVGNVVRR DLSLATAAVA GLDLLDASDD DEDVNGKGIG YPAMSAAVVA AAARSTLRPP SLQTLLEGTP
201: ESATVPYTSS SGADSESKTA DKSSITRKLK HDVIEGVNQL IHEIAGCHEQ IAEQAVEHIH QNEVILTLGS SRTVLEFLCA AKEKKRSFRV FVAEGAPRYQ
301: GHLLAKELVA RGLQTTVITD SAVFAMISRV NMVIIGAHAV MANGGVIGPV GVNMAALAAK KHAVPFVVLA GSHKLCPLYP HNPEVLLNEL RSPSELLDFG
401: EFSDCLDFGS GSGSPLLQVV NPTFDYVPPS LVSLFITDTG GHNPSYMYRL IADYYSADDL VM

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.