Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040371.1-P | Field mustard | cytosol | 90.46 | 93.67 |
| CDY28065 | Canola | cytosol | 93.15 | 92.93 |
| VIT_13s0139g00250.t01 | Wine grape | cytosol | 82.64 | 81.06 |
| CDY08006 | Canola | extracellular | 16.63 | 80.0 |
| KRH39206 | Soybean | cytosol | 81.17 | 80.0 |
| KRH48472 | Soybean | endoplasmic reticulum | 80.68 | 79.52 |
| GSMUA_Achr11P... | Banana | cytosol | 59.9 | 77.04 |
| KRH30036 | Soybean | cytosol | 77.02 | 75.9 |
| Solyc11g005600.1.1 | Tomato | nucleus | 76.28 | 75.73 |
| CDY34906 | Canola | mitochondrion | 82.89 | 73.38 |
| KXG38620 | Sorghum | cytosol | 74.08 | 72.84 |
| Zm00001d033046_P002 | Maize | cytosol | 73.11 | 71.88 |
| PGSC0003DMT400044316 | Potato | cytosol | 71.39 | 70.36 |
| TraesCS1B01G152300.1 | Wheat | plastid | 69.68 | 69.01 |
| TraesCS1A01G138500.3 | Wheat | plastid | 69.68 | 68.84 |
| TraesCS1D01G135300.2 | Wheat | plastid | 69.68 | 68.84 |
| HORVU1Hr1G035490.4 | Barley | plastid | 69.68 | 68.51 |
| Zm00001d014246_P004 | Maize | cytosol | 73.35 | 67.26 |
| GSMUA_Achr11P... | Banana | cytosol | 15.16 | 59.62 |
| Os10t0392700-02 | Rice | cytosol, mitochondrion, plastid | 48.41 | 58.93 |
| Bra029637.1-P | Field mustard | cytosol | 93.64 | 50.39 |
| CDY24631 | Canola | cytosol | 91.69 | 49.87 |
| AT2G44070.1 | Thale cress | cytosol | 19.56 | 24.02 |
| AT1G53880.1 | Thale cress | cytosol | 19.07 | 20.26 |
| AT1G72340.2 | Thale cress | cytosol, plastid | 18.34 | 18.34 |
| AT1G53900.2 | Thale cress | mitochondrion | 19.07 | 12.91 |
| AT5G38640.1 | Thale cress | cytosol | 20.05 | 12.77 |
| AT1G48970.1 | Thale cress | mitochondrion | 18.58 | 11.41 |
Protein Annotations
| KEGG:00270+5.3.1.23 | MapMan:17.4.1.2.3.2 | Gene3D:3.40.50.10470 | EntrezGene:819918 | ProteinID:AEE74526.1 | EMBL:AK318920 |
| ArrayExpress:AT3G07300 | EnsemblPlantsGene:AT3G07300 | RefSeq:AT3G07300 | TAIR:AT3G07300 | RefSeq:AT3G07300-TAIR-G | EnsemblPlants:AT3G07300.3 |
| TAIR:AT3G07300.3 | Unigene:At.40361 | UniProt:B3H7H1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0044237 | InterPro:IF-2B-related | RefSeq:NP_001319491.1 | InterPro:NagB/RpiA_transferase-like | PFAM:PF01008 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR10233 | PANTHER:PTHR10233:SF9 |
| SUPFAM:SSF100950 | UniParc:UPI0001739244 | SEG:seg | : | : | : |
Description
AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
Coordinates
chr3:-:2324617..2327659
Molecular Weight (calculated)
43802.6 Da
IEP (calculated)
5.895
GRAVY (calculated)
0.075
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKSKSAD KSSLTRKLKH DVIEGVNQLI QEIAGCHEQI
201: AEQAIEHIHQ NEVILTLGSS RTVLEFLCAA KEKKRSFRVF VAEGAPRYQG HLLAKELVAR GLQTTVITDS AVFAMISRVN MVIIGAHAVM ANGGVIGPVG
301: VNMAALAAQK HAVPFVVLAG SHKLCPLYPH NPEVLLNELR SPSELLDFGE FSDCLDFGAG SGSLQVVNPT FDYVPPNLVS LFITDTGGHN PSYMYRLIAD
401: YYSADDLVM
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKSKSAD KSSLTRKLKH DVIEGVNQLI QEIAGCHEQI
201: AEQAIEHIHQ NEVILTLGSS RTVLEFLCAA KEKKRSFRVF VAEGAPRYQG HLLAKELVAR GLQTTVITDS AVFAMISRVN MVIIGAHAVM ANGGVIGPVG
301: VNMAALAAQK HAVPFVVLAG SHKLCPLYPH NPEVLLNELR SPSELLDFGE FSDCLDFGAG SGSLQVVNPT FDYVPPNLVS LFITDTGGHN PSYMYRLIAD
401: YYSADDLVM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.