CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48472	Soybean	endoplasmic reticulum	98.55	98.55
KRH30036	Soybean	cytosol	85.54	85.54
VIT_13s0139g00250.t01	Wine grape	cytosol	85.54	85.13
AT3G07300.3	Thale cress	cytosol	80.0	81.17
GSMUA_Achr11P...	Banana	cytosol	61.2	79.87
CDY28065	Canola	cytosol	78.8	79.76
Bra040371.1-P	Field mustard	cytosol	75.18	78.99
Solyc11g005600.1.1	Tomato	nucleus	77.59	78.16
KXG38620	Sorghum	cytosol	74.94	74.76
Zm00001d033046_P002	Maize	cytosol	73.73	73.56
TraesCS1B01G152300.1	Wheat	plastid	71.81	72.16
TraesCS1D01G135300.2	Wheat	plastid	71.81	71.98
CDY08006	Canola	extracellular	14.7	71.76
TraesCS1A01G138500.3	Wheat	plastid	71.57	71.74
HORVU1Hr1G035490.4	Barley	plastid	71.81	71.63
PGSC0003DMT400044316	Potato	cytosol	70.36	70.36
Zm00001d014246_P004	Maize	cytosol	74.46	69.28
CDY34906	Canola	mitochondrion	69.64	62.55
GSMUA_Achr11P...	Banana	cytosol	15.66	62.5
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	49.64	61.31
Bra029637.1-P	Field mustard	cytosol	79.28	43.29
CDY24631	Canola	cytosol	77.35	42.69
KRH47707	Soybean	cytosol	18.07	21.61
KRH69015	Soybean	cytosol	18.55	20.16
KRG97288	Soybean	extracellular	18.55	19.44
KRH03820	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	18.8	14.1
KRH01494	Soybean	nucleus	20.24	13.21
KRH18264	Soybean	cytosol	20.48	12.9
KRG93828	Soybean	endoplasmic reticulum, nucleus	20.24	12.73
KRH54799	Soybean	plastid	18.07	11.0

Protein Annotations

KEGG:00270+5.3.1.23	EntrezGene:100778545	MapMan:17.4.1.2.3.2	Gene3D:3.40.50.10470	EMBL:ACUP02005924	EnsemblPlantsGene:GLYMA_09G185000
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0044237	UniProt:I1M2R6	InterPro:IF-2B-related	EnsemblPlants:KRH39206	ProteinID:KRH39206
ProteinID:KRH39206.1	InterPro:NagB/RpiA_transferase-like	PFAM:PF01008	PANTHER:PTHR10233	PANTHER:PTHR10233:SF9	MetaCyc:PWY-4361
MetaCyc:PWY-7174	SUPFAM:SSF100950	UniParc:UPI000233B519	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:41007306..41013808

Molecular Weight (calculated)

44581.1 Da

IEP (calculated)

6.019

GRAVY (calculated)

-0.062

Length

415 amino acids

Sequence
(BLAST)

001: MPDVQTLVND FLNQLKKRKI EGSQATAKLT AELLRSVISQ QRVPHTNQAT ALINAVRAVG EQLIAANPVE LAVGNIVRRV LHIIREEDLS LATAAMDGLG
101: VSAASDDEDD AERDENPVLS AAAVAAAARS TLRPPSLQTL LEDTSDSAAP PHTSSSGGES DGRSRSVEKG SRGRKLKHDV IEAVNELIQD ISTCYEQIAE
201: QAVEHIHHNE VILTLGSSKT VLEFLYAAKE KQRSFKVFVA EGAPRYQGHL LAKELAARGL QTTVITDSAV FAMISRVNMV IVGAHAVMAN GGVIAPVGLN
301: MVALAAQRHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCMDSASGAG SLHVVNPTFD YVPPKLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVVKRR PTTGS

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.