CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0645200-01	Rice	cytosol, plastid	15.98	72.67
KRH03820	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	57.92	71.43
Zm00001d033223_P003	Maize	cytosol	23.75	69.53
VIT_17s0000g04230.t01	Wine grape	plastid	60.7	63.79
PGSC0003DMT400059378	Potato	cytosol, plastid	56.89	62.58
Solyc12g038340.1.1	Tomato	nucleus	55.57	61.13
KRH01494	Soybean	nucleus	55.72	59.75
KRG93828	Soybean	endoplasmic reticulum, nucleus	57.04	58.94
KRH18264	Soybean	cytosol	56.6	58.57
GSMUA_Achr7P01240_001	Banana	cytosol	54.69	57.74
KXG24018	Sorghum	mitochondrion, plastid	50.44	57.62
TraesCS5D01G384000.3	Wheat	mitochondrion	51.76	57.59
TraesCS5B01G376300.1	Wheat	mitochondrion	51.76	57.59
GSMUA_Achr4P22890_001	Banana	cytosol	55.43	57.53
Zm00001d031081_P001	Maize	endoplasmic reticulum, vacuole	45.89	57.33
TraesCS5A01G374400.3	Wheat	mitochondrion	51.17	56.93
Zm00001d013692_P001	Maize	cytosol	50.59	56.65
HORVU5Hr1G092900.2	Barley	mitochondrion	51.47	55.1
Os12t0617100-01	Rice	mitochondrion	48.83	54.86
EER91168	Sorghum	plastid	52.79	49.86
KRH69015	Soybean	cytosol	13.93	24.87
KRH47707	Soybean	cytosol	12.61	24.78
KRG97288	Soybean	extracellular	13.49	23.23
KRH39206	Soybean	cytosol	11.0	18.07
KRH48472	Soybean	endoplasmic reticulum	10.85	17.83
KRH30036	Soybean	cytosol	10.56	17.35

Protein Annotations

KEGG:00270+5.3.1.23	MapMan:17.4.1.2.3.4	Gene3D:3.40.50.10470	EMBL:ACUP02003584	EnsemblPlantsGene:GLYMA_06G209700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0044237	UniProt:I1KD70	InterPro:IF-2B-related	EnsemblPlants:KRH54799	ProteinID:KRH54799	ProteinID:KRH54799.1
InterPro:NagB/RpiA_transferase-like	PFAM:PF01008	PANTHER:PTHR10233	PANTHER:PTHR10233:SF27	MetaCyc:PWY-4361	MetaCyc:PWY-7174
SUPFAM:SSF100950	UniParc:UPI000295EB45	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:20658133..20664516

Molecular Weight (calculated)

75339.5 Da

IEP (calculated)

9.748

GRAVY (calculated)

-0.286

Length

682 amino acids

Sequence
(BLAST)

001: MPPLLFFSEN PIGRNHRNLK LRLRYKTNPN SFFISLSIFL FKQHFHTVIT AIPTRLPPMD GRRASRASAA DPKVRRIGFF APQSEPDPTP PPPNFVSVPP
101: LRHLSAAVPV PDTGIRRQLS GDLVPIGSYN PAESLLGTSP AASSLSSSIV GVGDKEFSED SSAAGWYRRG DSDFTGVGFD LPVVKPPGNS PAVNAKNVAG
201: EKREESGKEV HPDLPSISKP LKEKNTKGER RALQEAQRAA KAASKADGNT TVAETRRAAP SKRMWQSSQK KDGPLVMSPV ATDKKSGDRP LEKERKKDAP
301: PPRMQFDDKN RVEKAKRRAV VDQNEARNRV ELFRHLPQYE RWTQLPKLES KFFQLDSVHP AVFKVGMRYL AGDISGSNAR CIEMLRAFQE AIIDYSTPPG
401: KVLVRDLTAK ISSYVSFFSE CRPLSISMGN AIRFVKSCVA KLPLSHTESE AKAALCSDIN QFINEKIILA DKVIVGHAAS KVRDGDVLLT YGSSCVVEMI
501: LLYAHDLGKQ FRVVVVDSRP KFESRALLRR LVARGLSCTY THINAVSYVM HEVTRVFLGA SSILCNGTAY AKVGTACVAM VAHTFRVPVL ICCEAYKFHE
601: RVQLDSICSN ELGDPDAVAV VPGRMDVNYL DNWTNQDNLQ LLNLFYDATP SDYVSAIVTD HGMIPPTSVA VIVREYGREH LI

Best Arabidopsis Sequence Match ( AT1G48970.1 )
(BLAST)

001: MDTRRGALAV PKVRRVGFFT SIEPPPESSL QRPNRSQSGP VDATTSSSPL SDSPSGNLIS PVLIPPSRHH SDNLTSRVAA AAAAPVPVPG PAAFRRYLTP
101: ERTLLHVGSY NPPDSLLGTS SPSSNGGLSE DSASLFGFQR SDSTKLSASL PNGGFDLTLA VRAPQESETK IATTSASQGK KKIAEVSGKS ESATTKPQKE
201: KEPKALKDKT TKAERRAIQE AQRAAKAAAK GEGSRRADES GRANPGKAAI KPQPKKERLP VTSSVSEKTA VAVEKEKRMD VPQTQMQYDD KSRVDKAKRR
301: AVVEQTESKN KVELFLHLPQ YERSNQLPNL SSNFFTLDSI HHAVYKVGLQ HLAGDISGDN ARCIAMLQAF QEAIEDYSTP PMKDLTMDLT AKINGYVSFL
401: IECRPLSMSM GNAIRFLKNQ IRKLPVNLSE SEAKSSLCSD IGRFIDEKTI IADKAIVQHA VTKIRDGEVL LTYGFSCVVE MILLYAHEIG KKFRVVIVDS
501: RPNLEGQKLL RRLVTRGLDC TYTHINAISY IMREATRVFL GASSIYSNGT LYARVGTSCI AMVANAFSVP VIVCCEAYKF HERVLLDSIC SNELGDPDAV
601: ANIPSFRTNA KHSKTMDNNK NLQFLNLMYD STPSEYISMI VSDYGMIPPT SIPVIVREYR RENLLL

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I048]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.