CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48472	Soybean	endoplasmic reticulum	85.54	85.54
KRH39206	Soybean	cytosol	85.54	85.54
VIT_13s0139g00250.t01	Wine grape	cytosol	80.48	80.1
GSMUA_Achr11P...	Banana	cytosol	59.52	77.67
AT3G07300.3	Thale cress	cytosol	75.9	77.02
Bra040371.1-P	Field mustard	cytosol	72.53	76.2
CDY28065	Canola	cytosol	74.7	75.61
Solyc11g005600.1.1	Tomato	nucleus	74.22	74.76
KXG38620	Sorghum	cytosol	70.84	70.67
Zm00001d033046_P002	Maize	cytosol	70.6	70.43
CDY08006	Canola	extracellular	13.98	68.24
TraesCS1A01G138500.3	Wheat	plastid	67.23	67.39
TraesCS1D01G135300.2	Wheat	plastid	66.99	67.15
TraesCS1B01G152300.1	Wheat	plastid	66.75	67.07
HORVU1Hr1G035490.4	Barley	plastid	66.75	66.59
PGSC0003DMT400044316	Potato	cytosol	66.51	66.51
Zm00001d014246_P004	Maize	cytosol	70.84	65.92
GSMUA_Achr11P...	Banana	cytosol	16.14	64.42
CDY34906	Canola	mitochondrion	66.75	59.96
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	46.51	57.44
Bra029637.1-P	Field mustard	cytosol	76.39	41.71
CDY24631	Canola	cytosol	74.46	41.09
KRH47707	Soybean	cytosol	17.59	21.04
KRH69015	Soybean	cytosol	18.07	19.63
KRG97288	Soybean	extracellular	18.07	18.94
KRH03820	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	18.55	13.92
KRH01494	Soybean	nucleus	18.8	12.26
KRH18264	Soybean	cytosol	19.28	12.14
KRG93828	Soybean	endoplasmic reticulum, nucleus	19.04	11.97
KRH54799	Soybean	plastid	17.35	10.56

Protein Annotations

KEGG:00270+5.3.1.23	EntrezGene:100807877	MapMan:17.4.1.2.3.2	Gene3D:3.40.50.10470	EMBL:ACUP02006841	EnsemblPlantsGene:GLYMA_11G154300
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0044237	UniProt:I1LLC8	InterPro:IF-2B-related	EnsemblPlants:KRH30036	ProteinID:KRH30036
ProteinID:KRH30036.1	InterPro:NagB/RpiA_transferase-like	PFAM:PF01008	PANTHER:PTHR10233	PANTHER:PTHR10233:SF9	MetaCyc:PWY-4361
MetaCyc:PWY-7174	SUPFAM:SSF100950	UniParc:UPI000233C83F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:+:12457346..12464142

Molecular Weight (calculated)

44479.2 Da

IEP (calculated)

5.387

GRAVY (calculated)

0.041

Length

415 amino acids

Sequence
(BLAST)

001: MPDVQALVND FVNLLKKRRI EGSQATAKQT AVLLRSVISQ QRVPHTNQAT VLINAVRAVG EQIIDVNPIE LAVGNIVRRV LHIIREEDLS LVTDAVAGFG
101: MFAGSDDEDD VERDDYPALS AASVAAAARS TSRPPSLQTL LEDVTDSAVV PPTPSSGGDS EGISRTLEKG SSGRKLKHDV IEAVNELIQD ITSCHEQIAE
201: QAVEHIHQNE VILTLGSSKT VLEFLCAAKE KKRSFKVVVA EGAPRYQGQV LAKELAARGI QTTVIADSAT FAMISQVNMV IVGAHAVMAN GGVIAPIGLH
301: MVALAAQRHA VPFVVLAGSH KLCPLYPHNP QVLLTELRSP SELLDFGEFS DLMDSATGSG SLHVVNPAFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVVKQR PTTGS

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.