Factsheet for Zm00001d033046_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38620	Sorghum	cytosol	98.08	98.08
Zm00001d014246_P004	Maize	cytosol	98.56	91.93
TraesCS1A01G138500.3	Wheat	plastid	89.9	90.34
TraesCS1D01G135300.2	Wheat	plastid	89.66	90.1
TraesCS1B01G152300.1	Wheat	plastid	89.42	90.07
HORVU1Hr1G035490.4	Barley	plastid	89.9	89.9
GSMUA_Achr11P...	Banana	cytosol	60.34	78.93
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	61.3	75.89
VIT_13s0139g00250.t01	Wine grape	cytosol	75.96	75.78
KRH39206	Soybean	cytosol	73.56	73.73
Bra040371.1-P	Field mustard	cytosol	69.71	73.42
KRH48472	Soybean	endoplasmic reticulum	73.08	73.25
AT3G07300.3	Thale cress	cytosol	71.88	73.11
CDY28065	Canola	cytosol	70.43	71.46
Solyc11g005600.1.1	Tomato	nucleus	69.95	70.63
KRH30036	Soybean	cytosol	70.43	70.6
CDY08006	Canola	extracellular	13.7	67.06
Solyc09g090400.2.1	Tomato	cytosol, plastid	60.58	65.45
PGSC0003DMT400044316	Potato	cytosol	64.9	65.06
GSMUA_Achr11P...	Banana	cytosol	15.87	63.46
CDY34906	Canola	mitochondrion	64.18	57.79
Bra029637.1-P	Field mustard	cytosol	71.15	38.95
CDY24631	Canola	cytosol	69.47	38.43
Zm00001d033223_P003	Maize	cytosol	13.22	23.61
Zm00001d041758_P001	Maize	cytoskeleton, cytosol, peroxisome	17.07	19.56
Zm00001d013692_P001	Maize	cytosol	20.43	13.96
Zm00001d031081_P001	Maize	endoplasmic reticulum, vacuole	17.07	13.0

Protein Annotations

KEGG:00270+5.3.1.23	MapMan:17.4.1.2.3.2	Gene3D:3.40.50.10470	UniProt:B4FA42	EMBL:BT033980	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0044237
InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	ProteinID:ONM06672.1	ProteinID:ONM06675.1	PFAM:PF01008	PANTHER:PTHR10233
PANTHER:PTHR10233:SF9	SUPFAM:SSF100950	UniParc:UPI00017B6169	EnsemblPlantsGene:Zm00001d033046	EnsemblPlants:Zm00001d033046_P002	EnsemblPlants:Zm00001d033046_T002
SEG:seg	:	:	:	:	:

Description

NagB/RpiA/CoA transferase-like superfamily protein

Coordinates

chr1:+:248442926..248461086

Molecular Weight (calculated)

44774.5 Da

IEP (calculated)

6.194

GRAVY (calculated)

-0.015

Length

416 amino acids

Sequence
(BLAST)

001: MPDVQPLVSD FVLKLKRRKV EGSHAVARQT AELLRSVVSQ HRMGSSANQA AALADAVRAV GEQLISANPI ELAVGNIVRR VLHIIKEEDI SSTAVGIEGL
101: SVTVDSDDEY DSEHDDRPAL SAAVLAAHAR NALRAPSLQT LLEDIPVSPA ISGTASSTGD SDGKSKSAGD KSSTRKLKHD VIAAIGDLID EIDSCYEPIS
201: EQAVELIHQN EVILTLGRSR TVKEFLYAAK EKKRSFRVFV AEGAPRYQGH VLAKELVEKG VQTTVITDSA VFAMISRVNM VIIGAHAIMA NGGVIAPVGM
301: NMVALAAQRH AVPFVVVAGS HKLCPLYPHN PQVLLNELKS PSDLLDFGEF SDCMNFSTQD GSPLLNVANP TFDYVPPKLV SLFITDTGGH SPSYMYRLIA
401: EYYSADDLVV RRKATS

Best Arabidopsis Sequence Match ( AT1G53880.1 )
(BLAST)

001: MWRESASFIL DKHQNNKPIS LTHSIDSPPP PSASMADENP NPNPISAYYQ TRAAHHGIVT SEWLEQAQAA VRRYPDRDSL VSGRPFSVIE DFNSWRQQPD
101: LAEAVAAIRA LAAVIRASEA TTMMELEIEL KKASDTLKSW DTTSISLTAG CDLFMRYVTR TSALEFEDFN SAKSRVLERA EKFGEISCKA RTIIAMLSQD
201: FIFDGCTILV HGFSRVVFEI LKTSAQNKKL FRVLCTEGRP DKTGVLLANE LAKLDIPVKL LIDSAVAYSM DEVDMVFVGA DGVVESGGII NMMGTYQIAL
301: VAQSMNKPVY VAAESYKFAR LYPLDQKDLE PALRPIDFSV PVPPKVEVER SARDYTPPQY LTLLFTDLGV LTPSVVSDEL IQLYL

Arabidopsis Description

Eukaryotic translation initiation factor 2B (eIF-2B) family protein [Source:TAIR;Acc:AT1G53880]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.