Factsheet for Bra040371.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G07300.3	Thale cress	cytosol	93.67	90.46
VIT_13s0139g00250.t01	Wine grape	cytosol	81.77	77.46
GSMUA_Achr11P...	Banana	cytosol	61.77	76.73
CDY34906	Canola	mitochondrion	88.86	75.97
KRH39206	Soybean	cytosol	78.99	75.18
KRH48472	Soybean	endoplasmic reticulum	78.73	74.94
KRH30036	Soybean	cytosol	76.2	72.53
Solyc11g005600.1.1	Tomato	nucleus	74.68	71.6
KXG38620	Sorghum	cytosol	74.18	70.43
Zm00001d033046_P002	Maize	cytosol	73.42	69.71
PGSC0003DMT400044316	Potato	cytosol	70.63	67.23
TraesCS1B01G152300.1	Wheat	plastid	70.13	67.07
TraesCS1A01G138500.3	Wheat	plastid	70.13	66.91
TraesCS1D01G135300.2	Wheat	plastid	70.13	66.91
HORVU1Hr1G035490.4	Barley	plastid	70.13	66.59
Zm00001d014246_P004	Maize	cytosol	73.67	65.25
GSMUA_Achr11P...	Banana	cytosol	14.68	55.77
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	47.34	55.65
Bra029637.1-P	Field mustard	cytosol	94.94	49.34
Bra041170.1-P	Field mustard	cytosol, mitochondrion	4.56	24.66
Bra039699.1-P	Field mustard	cytosol	20.25	20.89
Bra008029.1-P	Field mustard	cytosol	18.23	20.45
Bra028196.1-P	Field mustard	nucleus	20.51	12.86
Bra014165.1-P	Field mustard	mitochondrion	20.0	12.02

Protein Annotations

EnsemblPlants:Bra040371.1	EnsemblPlants:Bra040371.1-P	EnsemblPlantsGene:Bra040371	Gene3D:3.40.50.10470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0044237	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	KEGG:00270+5.3.1.23	PANTHER:PTHR10233
PANTHER:PTHR10233:SF9	PFAM:PF01008	SEG:seg	SUPFAM:SSF100950	UniParc:UPI0002544929	UniProt:M4FGZ3
MapMan:17.4.1.2.3.2	:	:	:	:	:

Description

AT3G07300 (E=6e-157) | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein

Coordinates

chrA01:+:27959234..27961625

Molecular Weight (calculated)

42091.6 Da

IEP (calculated)

6.392

GRAVY (calculated)

0.094

Length

395 amino acids

Sequence
(BLAST)

001: MPDVQSMVLE FVNKLRKRKI EGSQATARCT VELLRSVISH HRVPHANQAS ALIDAVKAVG AQLVAANPVE LAVGNVVRRA AVAGLDLLDA SDDDEDVNGK
101: GIGYPAMSAA VVAAAARSTL RPPSLQTLLE GTPESATAPY TSSSGADSES KTADKSSITR KLKHDVIEGV NQLIHEIAGC HEQIAEQAVE HIHQNEVILT
201: LGSSRTVLEF LCAAKEKKRS FRVFVAEGAP RYQGHLLAKE LVARGLQTTV ITDSAVFAMI SRVNMVIIGA HAVMANGGVI GPVGVNMAAL AAKKHAVPFV
301: VLAGSHKLCP LYPHNPEVLL NELRSPSELL DFGEFSDCLD FGTGSGSPLL QVVNPTFDYV PPSLVSLFIT DTGGHNPSYM YRLIADYYSA DDLVM

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.