Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- plastid 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G135300.2 | Wheat | plastid | 99.27 | 99.03 |
TraesCS1A01G138500.3 | Wheat | plastid | 99.03 | 98.79 |
HORVU1Hr1G035490.4 | Barley | plastid | 99.27 | 98.56 |
KXG38620 | Sorghum | cytosol | 90.31 | 89.66 |
Zm00001d033046_P002 | Maize | cytosol | 90.07 | 89.42 |
Zm00001d014246_P004 | Maize | cytosol | 90.31 | 83.63 |
GSMUA_Achr11P... | Banana | cytosol | 59.32 | 77.04 |
Os10t0392700-02 | Rice | cytosol, mitochondrion, plastid | 61.99 | 76.19 |
VIT_13s0139g00250.t01 | Wine grape | cytosol | 75.06 | 74.34 |
KRH39206 | Soybean | cytosol | 72.16 | 71.81 |
KRH48472 | Soybean | endoplasmic reticulum | 71.43 | 71.08 |
Solyc11g005600.1.1 | Tomato | nucleus | 70.7 | 70.87 |
Bra040371.1-P | Field mustard | cytosol | 67.07 | 70.13 |
AT3G07300.3 | Thale cress | cytosol | 69.01 | 69.68 |
CDY28065 | Canola | cytosol | 68.04 | 68.54 |
PGSC0003DMT400044316 | Potato | cytosol | 67.31 | 66.99 |
KRH30036 | Soybean | cytosol | 67.07 | 66.75 |
Solyc09g090400.2.1 | Tomato | cytosol, plastid | 61.5 | 65.97 |
CDY08006 | Canola | extracellular | 13.56 | 65.88 |
GSMUA_Achr11P... | Banana | cytosol | 15.74 | 62.5 |
CDY34906 | Canola | mitochondrion | 62.47 | 55.84 |
Bra029637.1-P | Field mustard | cytosol | 68.77 | 37.37 |
CDY24631 | Canola | cytosol | 67.07 | 36.84 |
TraesCS5B01G113900.1 | Wheat | cytosol | 14.53 | 17.24 |
TraesCS5B01G376300.1 | Wheat | mitochondrion | 19.85 | 13.38 |
Protein Annotations
EnsemblPlants:TraesCS1B01G152300.1 | EnsemblPlantsGene:TraesCS1B01G152300 | Gene3D:3.40.50.10470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0044237 | InterPro:IF-2B-related | InterPro:NagB/RpiA_transferase-like | KEGG:00270+5.3.1.23 | PANTHER:PTHR10233 | PANTHER:PTHR10233:SF9 |
PFAM:PF01008 | SUPFAM:SSF100950 | MapMan:17.4.1.2.3.2 | : | : | : |
Description
No Description!
Coordinates
chr1B:-:242735821..242743867
Molecular Weight (calculated)
44715.5 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.033
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDMQPLISD FVLKLKRRKV EGSHAVARQT AELLRSVVSQ HRMSSTNQAA ALADAIHAVG EHLIAANPIE LAVGNTVRRV LHIIKEEDIS FTAVGIEGLS
101: VTAVSDDECD SGNDDRPTLS AAVLASHARN ALRAPSLQTL LDDIPVSTAL THSSSSAGDS DGKTGDKSLK TRKLKHDVIA AIGDLIEEID TCYDQISEQA
201: VEHIHQNEVI LTLGRSRTVK EFLYAAKEKK RSFRVFVAEG APRYQGHALA KELVEKGVQT TVITDSAVFA MISRVNMVIV GVHAIMANGG VIAPVGMNMV
301: ALAAQRHAVP FVVVAGSHKL CPLYPHNPEV LLNELKSPSD LLDFGEFSNC MNFSTQDGTP LLNVANPTFD YVPPKLVSLF ITDTGGHSPS YMYRLISEYY
401: SADDLVVRRK STS
101: VTAVSDDECD SGNDDRPTLS AAVLASHARN ALRAPSLQTL LDDIPVSTAL THSSSSAGDS DGKTGDKSLK TRKLKHDVIA AIGDLIEEID TCYDQISEQA
201: VEHIHQNEVI LTLGRSRTVK EFLYAAKEKK RSFRVFVAEG APRYQGHALA KELVEKGVQT TVITDSAVFA MISRVNMVIV GVHAIMANGG VIAPVGMNMV
301: ALAAQRHAVP FVVVAGSHKL CPLYPHNPEV LLNELKSPSD LLDFGEFSNC MNFSTQDGTP LLNVANPTFD YVPPKLVSLF ITDTGGHSPS YMYRLISEYY
401: SADDLVVRRK STS
001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM
Arabidopsis Description
AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.