Factsheet for TraesCS1D01G135300.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G138500.3	Wheat	plastid	99.28	99.28
TraesCS1B01G152300.1	Wheat	plastid	99.03	99.27
HORVU1Hr1G035490.4	Barley	plastid	99.28	98.8
Zm00001d033046_P002	Maize	cytosol	90.1	89.66
KXG38620	Sorghum	cytosol	90.1	89.66
Zm00001d014246_P004	Maize	cytosol	90.34	83.86
GSMUA_Achr11P...	Banana	cytosol	59.42	77.36
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	61.84	76.19
VIT_13s0139g00250.t01	Wine grape	cytosol	74.88	74.34
KRH39206	Soybean	cytosol	71.98	71.81
KRH48472	Soybean	endoplasmic reticulum	71.26	71.08
Solyc11g005600.1.1	Tomato	nucleus	70.53	70.87
Bra040371.1-P	Field mustard	cytosol	66.91	70.13
AT3G07300.3	Thale cress	cytosol	68.84	69.68
CDY28065	Canola	cytosol	67.87	68.54
KRH30036	Soybean	cytosol	67.15	66.99
PGSC0003DMT400044316	Potato	cytosol	67.15	66.99
Solyc09g090400.2.1	Tomato	cytosol, plastid	61.35	65.97
CDY08006	Canola	extracellular	13.53	65.88
GSMUA_Achr11P...	Banana	cytosol	15.7	62.5
CDY34906	Canola	mitochondrion	62.32	55.84
Bra029637.1-P	Field mustard	cytosol	68.6	37.37
CDY24631	Canola	cytosol	66.91	36.84
TraesCS5D01G121400.1	Wheat	cytosol	17.15	19.61
TraesCS5D01G384000.3	Wheat	mitochondrion	20.29	13.7

Protein Annotations

EnsemblPlants:TraesCS1D01G135300.2	EnsemblPlantsGene:TraesCS1D01G135300	Gene3D:3.40.50.10470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0044237	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	KEGG:00270+5.3.1.23	PANTHER:PTHR10233	PANTHER:PTHR10233:SF9
PFAM:PF01008	SEG:seg	SUPFAM:SSF100950	MapMan:17.4.1.2.3.2	:	:

Description

No Description!

Coordinates

chr1D:-:176380586..176392799

Molecular Weight (calculated)

44756.6 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.028

Length

414 amino acids

Sequence
(BLAST)

001: MPDMQPLISD FVLKLKRRKV EGSHAVARQT AELLRSVVSQ HRMGSTNQAA ALADAIHAVG EHLIAANPIE LAVGNTVRRV LHIIKEEDIS FTAVGIEGLS
101: VTAVSDDECD SGNDDRPTLS AAVLASHARN ALRAPSLQTL LDDIPVSTAL SHSSSSAGDS DGKTAGDKSL KTRKLKHDVI AAIGDLIEEI DTCYDQISEQ
201: AVEHIHQNEV ILTLGRSRTV KEFLYAAKEK KRSFRVFVAE GAPRYQGHAL AKELVEKGIQ TTVITDSAVF AMISRVNMVI VGVHAIMANG GVIAPVGMNM
301: VALAAQRHAV PFVVVAGSHK LCPLYPHNPE VLLNELKSPS DLLDFGEFSN CMNFSTQDGT PLLNVANPTF DYVPPKLVSL FITDTGGHSP SYMYRLISEY
401: YSADDLVVRR KSTS

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.