Factsheet for GSMUA_Achr11P20210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08006	Canola	extracellular	18.24	68.24
VIT_13s0139g00250.t01	Wine grape	cytosol	85.85	65.47
Bra040371.1-P	Field mustard	cytosol	76.73	61.77
Solyc11g005600.1.1	Tomato	nucleus	79.87	61.65
KRH39206	Soybean	cytosol	79.87	61.2
KXG38620	Sorghum	cytosol	79.87	61.06
KRH48472	Soybean	endoplasmic reticulum	79.56	60.96
Zm00001d033046_P002	Maize	cytosol	78.93	60.34
AT3G07300.3	Thale cress	cytosol	77.04	59.9
TraesCS1A01G138500.3	Wheat	plastid	77.67	59.66
KRH30036	Soybean	cytosol	77.67	59.52
TraesCS1D01G135300.2	Wheat	plastid	77.36	59.42
TraesCS1B01G152300.1	Wheat	plastid	77.04	59.32
HORVU1Hr1G035490.4	Barley	plastid	77.04	58.89
CDY28065	Canola	cytosol	75.16	58.29
Zm00001d014246_P004	Maize	cytosol	79.87	56.95
PGSC0003DMT400044316	Potato	cytosol	71.07	54.46
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	56.29	53.27
Solyc09g090400.2.1	Tomato	cytosol, plastid	64.47	53.25
CDY34906	Canola	mitochondrion	76.42	52.6
CDY24631	Canola	cytosol	75.79	32.05
Bra029637.1-P	Field mustard	cytosol	75.79	31.71
GSMUA_Achr11P...	Banana	cytosol	21.7	24.91
GSMUA_Achr8P16800_001	Banana	mitochondrion, plastid	21.07	17.01
GSMUA_Achr11P...	Banana	cytosol	4.4	13.46
GSMUA_Achr7P01240_001	Banana	cytosol	20.75	10.22
GSMUA_Achr4P22890_001	Banana	cytosol	20.44	9.89

Protein Annotations

EnsemblPlants:GSMUA_Achr11P20210_001	EnsemblPlants:GSMUA_Achr11T20210_001	EnsemblPlantsGene:GSMUA_Achr11G20210_001	Gene3D:3.40.50.10470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0044237	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	KEGG:00270+5.3.1.23	PANTHER:PTHR10233
PANTHER:PTHR10233:SF9	PFAM:PF01008	SEG:seg	SUPFAM:SSF100950	UniParc:UPI00029641CB	UniProt:M0RTV1
MapMan:17.4.1.2.3.2	:	:	:	:	:

Description

initiation factor 2 subunit family domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G20210_001]

Coordinates

chr11:+:21179460..21184838

Molecular Weight (calculated)

34125.6 Da

IEP (calculated)

5.515

GRAVY (calculated)

-0.054

Length

318 amino acids

Sequence
(BLAST)

001: MEGLGLTAGS DDDEGEHEDR PGLSAAAVAA AARSTLRAPS LQTLLEDIPE SAVAPHPSSS GGDSEGKSKS ADRGSRSKKL KHDVIEAINE LIQDIDTCHE
101: LISEQAVEHI HQNEVILTLG RSRTVKEFLC AAKEKKRTFR VFVAEGAPRY QGHVLAKELV GKGIQTTVIT DSAVFAMISR VNMVIVGAHA IMANGGVIAP
201: VGINMVALAA QRHAVPFVVV AGSHKLCPLY PHNPEVLLNE FRCPSDLLDF GEFSDCMDYG SLGGSPLLHV VNPAFDYVQP KLVSLFITDT GGHNPSYVYR
301: LIADYYSADD LVVQQNST

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.