CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	68.24	18.24
CDY28065	Canola	cytosol	82.35	17.07
AT3G07300.3	Thale cress	cytosol	80.0	16.63
CDY34906	Canola	mitochondrion	83.53	15.37
KRH48472	Soybean	endoplasmic reticulum	72.94	14.94
VIT_13s0139g00250.t01	Wine grape	cytosol	72.94	14.87
Solyc11g005600.1.1	Tomato	nucleus	71.76	14.81
KRH39206	Soybean	cytosol	71.76	14.7
KXG38620	Sorghum	cytosol	69.41	14.18
KRH30036	Soybean	cytosol	68.24	13.98
Zm00001d033046_P002	Maize	cytosol	67.06	13.7
TraesCS1B01G152300.1	Wheat	plastid	65.88	13.56
TraesCS1D01G135300.2	Wheat	plastid	65.88	13.53
TraesCS1A01G138500.3	Wheat	plastid	65.88	13.53
HORVU1Hr1G035490.4	Barley	plastid	65.88	13.46
Zm00001d014246_P004	Maize	cytosol	69.41	13.23
PGSC0003DMT400044316	Potato	cytosol	62.35	12.77
CDY24631	Canola	cytosol	83.53	9.44
Os10t0392700-02	Rice	cytosol, mitochondrion, plastid	22.35	5.65
CDY24066	Canola	cytosol	18.82	4.16
CDY36614	Canola	cytosol	18.82	4.15
CDY03642	Canola	mitochondrion	16.47	3.78
CDX82154	Canola	mitochondrion	16.47	3.74
CDX72907	Canola	cytosol	16.47	3.64
CDX96399	Canola	cytosol	16.47	3.63
CDY49077	Canola	cytosol, plastid	17.65	2.92
GSMUA_Achr11P...	Banana	cytosol	3.53	2.88
CDY01647	Canola	cytosol	18.82	2.54
CDX74513	Canola	nucleus	18.82	2.54
CDY16477	Canola	mitochondrion	16.47	2.13
CDX77270	Canola	mitochondrion	16.47	2.13
CDY27424	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY08006	EnsemblPlantsGene:GSBRNA2T00125249001	Gene3D:3.40.50.10470	InterPro:NagB/RpiA_transferase-like	ProteinID:CDY08006	ProteinID:CDY08006.1
SUPFAM:SSF100950	UniParc:UPI0004EE6324	UniProt:A0A078F3R7	MapMan:35.2	:	:

Description

BnaC03g35170DBnaC03g35170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3R7]

Coordinates

chrLK031982:+:563318..564798

Molecular Weight (calculated)

9235.2 Da

IEP (calculated)

6.500

GRAVY (calculated)

0.162

Length

85 amino acids

Sequence
(BLAST)

1: MAALTAKKKH AVPFVVLAGS HKLCPLYPHN PEVLLNELRS PSELLDFGEF SDCLDFGLGS GSPLLQVVNP TFDSSRSHQT LLAFL

Best Arabidopsis Sequence Match ( AT3G07300.1 )
(BLAST)

001: MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD
101: LLDASDDDDV DNCKGIGFPA MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV IEGVNQLIQE IAGCHEQIAE
201: QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN
301: MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY
401: SADDLVM

Arabidopsis Description

AT3G07300 protein [Source:UniProtKB/TrEMBL;Acc:B3H7H1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.