CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008029.1-P	Field mustard	cytosol	94.86	99.72
CDX82154	Canola	mitochondrion	98.65	97.59
CDX72907	Canola	cytosol	96.76	92.99
CDX96399	Canola	cytosol	96.76	92.75
AT1G72340.2	Thale cress	cytosol, plastid	95.41	86.31
GSMUA_Achr11P...	Banana	cytosol	62.7	83.75
KRH69015	Soybean	cytosol	83.24	80.63
PGSC0003DMT400074245	Potato	cytosol	85.95	79.7
KRH47707	Soybean	cytosol	74.59	79.54
CDY36614	Canola	cytosol	81.62	78.24
KRG97288	Soybean	extracellular	82.97	77.53
Solyc12g049580.1.1	Tomato	nucleus	85.68	77.51
CDY24066	Canola	cytosol	80.54	77.4
TraesCS5D01G121400.1	Wheat	cytosol	73.51	75.14
TraesCS5A01G109200.2	Wheat	cytosol	73.24	74.86
Zm00001d041758_P001	Maize	cytoskeleton, cytosol, peroxisome	72.97	74.38
HORVU5Hr1G038720.1	Barley	cytosol	72.7	74.31
OQU79155	Sorghum	cytosol	73.24	74.04
GSMUA_Achr8P16800_001	Banana	mitochondrion, plastid	78.65	73.86
Os12t0497400-01	Rice	cytosol	74.86	72.89
TraesCS5B01G113900.1	Wheat	cytosol	66.49	70.69
VIT_09s0002g00390.t01	Wine grape	mitochondrion, plastid	85.14	54.4
CDY28065	Canola	cytosol	19.73	17.8
CDY08006	Canola	extracellular	3.78	16.47
CDY49077	Canola	cytosol, plastid	21.62	15.59
CDY34906	Canola	mitochondrion	18.38	14.72
CDY01647	Canola	cytosol	24.59	14.47
CDX74513	Canola	nucleus	24.59	14.44
CDY16477	Canola	mitochondrion	23.51	13.24
CDX77270	Canola	mitochondrion	23.51	13.24
CDY27424	Canola	cytosol	3.24	9.84
CDY24631	Canola	cytosol	19.46	9.57

Protein Annotations

KEGG:00270+5.3.1.23	Gene3D:1.20.120.1070	MapMan:17.4.1.2.3.1	Gene3D:3.40.50.10470	GO:A0A078ERH6	EnsemblPlants:CDY03642
ProteinID:CDY03642	ProteinID:CDY03642.1	ncoils:Coil	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0044237	EnsemblPlantsGene:GSBRNA2T00116418001	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	PFAM:PF01008	PANTHER:PTHR10233
PANTHER:PTHR10233:SF18	MetaCyc:PWY-4361	MetaCyc:PWY-7174	SUPFAM:SSF100950	UniPathway:UPA00904	UniParc:UPI0004EE0ACC
SEG:seg	:	:	:	:	:

Description

BnaA02g15950D

Coordinates

chrLK031945:-:63544..65708

Molecular Weight (calculated)

40696.9 Da

IEP (calculated)

5.016

GRAVY (calculated)

0.004

Length

370 amino acids

Sequence
(BLAST)

001: MWRRSASFIL DRSSNSPPMA DTTQNPDAIS AYYQTRAAHH GVITSDWLAQ AQAAVEQPDS SVSGLGPAKS FNVIDEFNGW RKQPDLAEAV AAIRAMAAVI
101: RASEATTMME LEIELKKASD TLKSWDKTSI SLTAGCDLFI RYVTRTSALE YEDFNSAKSR LLERAEKFGE ISCKARKIIA MLSQDFIFDG CTILVHGLSR
201: VVLEVLKTAA QNNKLFRVLC TEGRPDGTGV LLSNELSKLD IPVKLLLDSA VAYSMDEVDM VFVGADGVVE SGGIINMMGT YQIALVAHSM NKPVYVAAES
301: YKFARLYPLD QKDMAPALRP IEFGVKIPAK VEVERSARDY TPPQYLTLLF TDLGVLSPSV VSDELIQLYL

Best Arabidopsis Sequence Match ( AT1G72340.2 )
(BLAST)

001: MIFLEKATVY YLQFFHFEEF SQEKKKSMWR RSPSFILDER RSSNSPPMAD TTRGPFQNPD SISAYYQTRA AHHGVITSDW LAQAQAAVGG VSGDAQHDLS
101: VTDLGNEKSF NVIEEFNNWR KQPDLAEAVA AIRALAAVIR ASEASTMMEL EIELKKASDT LKSWDKTSIS LTAGCDLFIR YVTRTSALEY EDFNSAKSRL
201: LERAEKFGEI SCKARRIIAM LSQDFIFDGC TILVHGLSRV VLEILKTAAQ NNKLFRVLCT EGRPDGTGVL LSSELSKLDI PVKLLLDSAV AYSMDEVDMV
301: FVGADGVVES GGIINMMGTY QIALVAHSMN KPVYVAAESY KFARLYPLDQ KDMAPALRPI EFGVKIPTKV EVERSARDYT PPQYLTLLFT DLGVLSPSVV
401: SDELIQLYL

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT1G72340]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.