Factsheet for TraesCS5B01G113900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G109200.2	Wheat	cytosol	93.1	89.5
TraesCS5D01G121400.1	Wheat	cytosol	92.24	88.67
HORVU5Hr1G038720.1	Barley	cytosol	91.67	88.12
Zm00001d041758_P001	Maize	cytoskeleton, cytosol, peroxisome	87.07	83.47
OQU79155	Sorghum	cytosol	87.07	82.79
Bra041170.1-P	Field mustard	cytosol, mitochondrion	17.24	82.19
Os12t0497400-01	Rice	cytosol	89.66	82.11
GSMUA_Achr11P...	Banana	cytosol	60.34	75.81
Bra008029.1-P	Field mustard	cytosol	69.54	68.75
KRH47707	Soybean	cytosol	66.38	66.57
CDY03642	Canola	mitochondrion	70.69	66.49
CDX82154	Canola	mitochondrion	70.98	66.04
KRH69015	Soybean	cytosol	72.13	65.71
CDX72907	Canola	cytosol	70.98	64.16
CDX96399	Canola	cytosol	70.98	63.99
GSMUA_Achr8P16800_001	Banana	mitochondrion, plastid	72.41	63.96
KRG97288	Soybean	extracellular	71.26	62.63
AT1G53880.1	Thale cress	cytosol	69.25	62.6
CDY36614	Canola	cytosol	69.25	62.44
PGSC0003DMT400074245	Potato	cytosol	71.55	62.41
Bra039699.1-P	Field mustard	cytosol	68.68	62.4
CDY24066	Canola	cytosol	68.97	62.34
Solyc12g049580.1.1	Tomato	nucleus	70.98	60.39
AT1G72340.2	Thale cress	cytosol, plastid	70.69	60.15
VIT_09s0002g00390.t01	Wine grape	mitochondrion, plastid	71.55	43.01
AT1G53900.2	Thale cress	mitochondrion	69.25	39.9
TraesCS1B01G152300.1	Wheat	plastid	17.24	14.53
TraesCS5B01G376300.1	Wheat	mitochondrion	21.55	12.23

Protein Annotations

EnsemblPlants:TraesCS5B01G113900.1	EnsemblPlantsGene:TraesCS5B01G113900	Gene3D:1.20.120.1070	Gene3D:3.40.50.10470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0044237	InterPro:IF-2B-related	InterPro:NagB/RpiA_transferase-like	KEGG:00270+5.3.1.23	ncoils:Coil
PANTHER:PTHR10233	PANTHER:PTHR10233:SF18	PFAM:PF01008	SEG:seg	SUPFAM:SSF100950	MapMan:17.4.1.2.3.1

Description

No Description!

Coordinates

chr5B:+:184281809..184286104

Molecular Weight (calculated)

38019.8 Da

IEP (calculated)

5.798

GRAVY (calculated)

-0.008

Length

348 amino acids

Sequence
(BLAST)

001: MFPRPTHFSL TSDSPLPCPL LPMELDAAQN PNPEPPISAY YQTRAEHHAV VSSDWLDHAA AAASLPDAHA DADAAPPPSP GSNGGGVIEE FNFWRRKPEA
101: AEAVAAIMAL AAVIRSSRAT TMMELEIELK KASDKLKSWD ATSISLSAAC DLFMRFVTRT SHLEHEKFDA AKSRLIERGE KFGEISLKAR KTIAMLSQDF
201: ISDGCTMLVH GYSRVVLEIL KLAASNRKLF RVLCTVDMVF VGADGVVESG GVINMMGTYQ IALVAHSMNK PLYVAAESYK FARLYPLDQK DMTPAHRPIN
301: FGVPIPAGVE VETSARDYTP PQYLTLLLTD LGVLTPSVVS DELIQLYL

Best Arabidopsis Sequence Match ( AT1G72340.1 )
(BLAST)

001: MWRRSPSFIL DERRSSNSPP MADTTRGPFQ NPDSISAYYQ TRAAHHGVIT SDWLAQAQAA VGGVSGDAQH DLSVTDLGNE KSFNVIEEFN NWRKQPDLAE
101: AVAAIRALAA VIRASEASTM MELEIELKKA SDTLKSWDKT SISLTAGCDL FIRYVTRTSA LEYEDFNSAK SRLLERAEKF GEISCKARRI IAMLSQDFIF
201: DGCTILVHGL SRVVLEILKT AAQNNKLFRV LCTEGRPDGT GVLLSSELSK LDIPVKLLLD SAVAYSMDEV DMVFVGADGV VESGGIINMM GTYQIALVAH
301: SMNKPVYVAA ESYKFARLYP LDQKDMAPAL RPIEFGVKIP TKVEVERSAR DYTPPQYLTL LFTDLGVLSP SVVSDELIQL YL

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT1G72340]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.