Factsheet for Bra026947.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16039	Canola	cytosol	90.31	99.71
CDY26600	Canola	cytosol	90.31	99.71
AT1G12910.1	Thale cress	cytosol	89.01	98.27
VIT_14s0068g00660.t01	Wine grape	cytosol	82.98	92.15
KRH06773	Soybean	nucleus	82.72	91.86
KRG94752	Soybean	cytosol	82.46	91.57
AT3G26640.1	Thale cress	cytosol	82.46	91.04
PGSC0003DMT400025654	Potato	cytosol	80.89	89.05
Solyc04g082470.1.1	Tomato	nucleus	80.1	88.18
GSMUA_Achr10P...	Banana	cytosol	65.71	86.85
Bra019798.1-P	Field mustard	extracellular	14.14	80.6
CDY39498	Canola	cytosol	24.87	80.51
GSMUA_Achr6P11830_001	Banana	cytosol	70.16	78.36
Os02t0524600-01	Rice	cytoskeleton, cytosol, nucleus	70.42	65.45
EES06890	Sorghum	cytoskeleton, cytosol, nucleus	70.94	65.14
OQU85036	Sorghum	cytoskeleton, cytosol, nucleus	70.94	65.14
CDY70646	Canola	nucleus	17.8	64.76
TraesCS6A01G193300.1	Wheat	cytosol	70.16	64.58
Zm00001d016653_P001	Maize	cytoskeleton, cytosol, nucleus	70.16	64.42
TraesCS6B01G221400.3	Wheat	cytoskeleton, cytosol, nucleus	68.85	63.68
CDY65574	Canola	nucleus	17.28	62.86
HORVU6Hr1G044360.6	Barley	cytosol, nucleus, plastid	64.92	58.77
Bra009770.1-P	Field mustard	cytosol	51.05	57.86
Bra029411.1-P	Field mustard	cytosol	17.28	55.0
Bra029410.1-P	Field mustard	cytosol	12.57	47.06

Protein Annotations

Gene3D:2.130.10.10	MapMan:27.1.5.1	EnsemblPlantsGene:Bra026947	EnsemblPlants:Bra026947.1	EnsemblPlants:Bra026947.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:M4EDT7
PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19919	PANTHER:PTHR19919:SF9
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0002542F82	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

AT1G12910 (E=6e-201) ATAN11, LWD1 | ATAN11 (ANTHOCYANIN11); nucleotide binding

Coordinates

chrA09:+:34442947..34444213

Molecular Weight (calculated)

43089.3 Da

IEP (calculated)

4.452

GRAVY (calculated)

-0.449

Length

382 amino acids

Sequence
(BLAST)

001: MVRRGKEVDY PSSRESEIEP EGGAEERRFL GFLDATMGTS SDPIQDGSDE QQKRSEIYTY EAPWQIYAMN WSVRRDKKYR LAITSLLEQY PNRVEIVQLD
101: ESNGEIRSDP NLAFEHPYPP TKTIFIPDKE CQRPDLLATS SDFLRLWRIA DDHSRVELKS CLNSNKNSEF CGPLTSFDWN EAEPRRIGTS STDTTCTIWD
201: IDREAVDTQL IAHDKEVLDI AWGGVGVFAS VSADGSVRVF DLRDKEHSTI IYESSEPDTP LVRLGWNKQD PRYMATIIMD SAKVVVLDIR FPALPVVELQ
301: RHQASVNAIA WAPHSSSHIC TAGDDSQALI WDISSMGQQV EGGLDPILAY TAGAEIEQLQ WSSSQPDWVA IAFSTKLQIL RV

Best Arabidopsis Sequence Match ( AT1G12910.1 )
(BLAST)

001: MGTSSDPIQD GSDEQQKRSE IYTYEAPWHI YAMNWSVRRD KKYRLAITSL LEQYPNRVEI VQLDESNGEI RSDPNLSFEH PYPPTKTIFI PDKECQRPDL
101: LATSSDFLRL WRIADDHSRV ELKSCLNSNK NSEFCGPLTS FDWNEAEPRR IGTSSTDTTC TIWDIEREAV DTQLIAHDKE VFDIAWGGVG VFASVSADGS
201: VRVFDLRDKE HSTIIYESSE PDTPLVRLGW NKQDPRYMAT IIMDSAKVVV LDIRFPALPV VELQRHQASV NAIAWAPHSS CHICTAGDDS QALIWDISSM
301: GQHVEGGLDP ILAYTAGAEI EQLQWSSSQP DWVAIAFSTK LQILRV

Arabidopsis Description

LWD1WD repeat-containing protein LWD1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.