Factsheet for GSMUA_Achr10P26120_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
extracellular 1
plastid 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P08340_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42400.1	GSMUA_Achr3P08340_001	AT2G18790.1	22904146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	48.44	73.37
VIT_10s0003g00500.t01	Wine grape	nucleus	38.67	61.24
KRH20362	Soybean	cytosol, nucleus, plastid	37.89	60.88
KRH50133	Soybean	cytosol, nucleus, plastid	37.76	60.8
PGSC0003DMT400058735	Potato	cytosol	26.17	60.73
Bra010864.1-P	Field mustard	nucleus	35.81	60.04
CDX90157	Canola	nucleus	35.68	59.96
KRH30880	Soybean	cytosol	35.55	59.48
KRH32695	Soybean	cytosol	35.42	58.49
CDY34095	Canola	nucleus	36.07	58.32
CDY30817	Canola	nucleus	36.46	57.97
CDY35753	Canola	nucleus	34.51	57.86
AT1G28520.2	Thale cress	nucleus	36.59	57.82
PGSC0003DMT400081241	Potato	cytosol	34.64	56.96
VIT_12s0028g02670.t01	Wine grape	mitochondrion, nucleus	38.8	56.33
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	33.72	55.46
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	34.24	55.14
GSMUA_Achr1P27380_001	Banana	cytosol	19.92	54.26
KRH25675	Soybean	nucleus	31.12	49.9
KRH55846	Soybean	nucleus	30.86	49.58
Bra032913.1-P	Field mustard	mitochondrion, plastid	36.33	49.12
GSMUA_Achr4P15020_001	Banana	nucleus	39.19	48.47
AT2G42400.1	Thale cress	nucleus	26.69	45.56
CDY64518	Canola	nucleus	27.21	44.56
CDX79871	Canola	nucleus	27.21	44.19
Bra004691.1-P	Field mustard	nucleus	27.34	43.66
CDY14829	Canola	nucleus	27.6	43.62
Bra016879.1-P	Field mustard	nucleus	27.47	43.59
CDY47967	Canola	nucleus	27.08	42.98
GSMUA_Achr6P22210_001	Banana	nucleus	29.17	41.71

Protein Annotations

MapMan:15.5.36	ncoils:Coil	GO:GO:0000003	GO:GO:0005575	GO:GO:0006139	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0048578	EnsemblPlantsGene:GSMUA_Achr10G26120_001	EnsemblPlants:GSMUA_Achr10P26120_001
EnsemblPlants:GSMUA_Achr10T26120_001	UniProt:M0RLI6	PANTHER:PTHR33873	TMHMM:TMhelix	UniParc:UPI0002964C9E	SEG:seg

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G26120_001]

Coordinates

chr10:-:29846933..29852620

Molecular Weight (calculated)

87008.6 Da

IEP (calculated)

7.764

GRAVY (calculated)

-0.297

Length

768 amino acids

Sequence
(BLAST)

001: MMCGDWPKKV PLRLSWCDGW CGLLDHGGLM CSIICPTELL EACRGPFPAI YLLVTSLLSC KQERDNNNND NNTNKEEEDK LYFSRKKKTS LLTISARRIR
101: HFYRSEGMRK RSGGVGGAVL HHHHRRWALR EKAKNRVNDL QGMFADVQSA HKEGRSADAA VLEEQLHQLL REWKAELGEP SPAASAASSL PKGNSRGPSD
201: LSSYIRRMLQ LNEEDDDATS KLAEPPLTSA NPKDEPLDVL GPDVGELQSG GVAVFQCILR TYLRDWLRVD FRRSFPTSFL ITRVRKLLMG KPFVIIQIII
301: SLLLGVMTLC SFFLLVTCTC ETSAACHRSA PSIVTFLLHL KTFQNLTKYI ILNDFHVLLC YLFSLIVPLV LICFIFNIFG QFSGFLSSCS LRRLNLKEHL
401: IYEMPDYVFL GTQQFKCGSI EAQRAALHCL EEANNLEFHH YNPHQELPQS VFLGFNAGGF DVGDLTPFLS EFIPAICPPP SAFLRPKCAL WDCPRPARGS
501: EWFEDYCSSF HATLALNEGP PGMTPVLRPG GIDLKDGPLF AALIAKTHGK NVGIPECEGA ATNKSPWNAP ELFDLLVLNG ESVREWLFFD KPRRAFESGN
601: RKQRSLPDYS GRGWHESRKQ VMKEFGGLKR SYYMDPQPLR HYEWHLYEYE INNCDACALY RLELKLVDPK KSIKGKVTSD SLVDLQQQMG RLNAENTMDS
701: KRYAKGRPRF QYKDSAETMY SALDFINQME NGESLHSSLD QKALVCDGVV YMRRFQTPVD DLNGYYGT

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.