Factsheet for Bra004691.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001650.1-P
Bra022192.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42400.1	Bra001650.1-P	AT2G18790.1	22904146
AT2G42400.1	Bra022192.1-P	AT2G18790.1	22904146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79871	Canola	nucleus	97.3	98.94
Bra016879.1-P	Field mustard	nucleus	81.08	80.58
AT2G42400.1	Thale cress	nucleus	70.69	75.56
Zm00001d022145_P001	Maize	cytosol	11.23	51.43
Bra010864.1-P	Field mustard	nucleus	45.11	47.38
KRH25675	Soybean	nucleus	43.87	44.05
VIT_12s0028g02670.t01	Wine grape	mitochondrion, nucleus	48.23	43.86
KRH55846	Soybean	nucleus	43.45	43.72
Zm00001d041158_P001	Maize	cytosol	27.03	42.07
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	42.41	40.24
GSMUA_Achr1P27380_001	Banana	cytosol	23.49	40.07
Bra032913.1-P	Field mustard	mitochondrion, plastid	46.15	39.08
Zm00001d045641_P001	Maize	cytosol	31.39	39.02
Zm00001d043500_P006	Maize	mitochondrion	43.04	37.7
Os01t0753000-01	Rice	cytosol	40.33	36.33
TraesCS3D01G291600.1	Wheat	mitochondrion	40.33	35.6
TraesCS1A01G335900.1	Wheat	nucleus	39.71	35.11
GSMUA_Achr4P15020_001	Banana	nucleus	44.49	34.46
TraesCS3B01G326500.4	Wheat	mitochondrion	40.12	33.51
TraesCS1D01G338300.2	Wheat	nucleus	40.33	33.28
HORVU1Hr1G076620.2	Barley	nucleus	40.33	32.99
TraesCS1B01G349200.1	Wheat	nucleus	40.12	32.94
EES18506	Sorghum	nucleus, plastid	40.96	32.35
KXG33380	Sorghum	mitochondrion	42.41	31.88
Os05t0515700-01	Rice	nucleus	41.79	31.36
Zm00001d038704_P002	Maize	plastid	39.29	31.29
TraesCS3A01G291900.1	Wheat	nucleus	40.54	30.52
HORVU3Hr1G072260.1	Barley	plastid	41.58	30.44
GSMUA_Achr6P22210_001	Banana	nucleus	33.26	29.8
Zm00001d012734_P002	Maize	cytosol	40.33	29.71
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	4.99	29.27
HORVU3Hr1G023830.1	Barley	cytosol, plastid	3.74	28.57
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	6.44	28.44
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	4.57	27.5
GSMUA_Achr10P...	Banana	plasma membrane	43.66	27.34
HORVU7Hr1G111470.1	Barley	nucleus	4.37	26.58
HORVU6Hr1G038750.11	Barley	nucleus	9.56	25.27
HORVU2Hr1G109410.1	Barley	mitochondrion	9.36	25.0
HORVU6Hr1G038800.6	Barley	nucleus	5.2	24.51
HORVU4Hr1G057220.1	Barley	nucleus	8.94	23.63

Protein Annotations

EnsemblPlants:Bra004691.1	EnsemblPlants:Bra004691.1-P	EnsemblPlantsGene:Bra004691	GO:GO:0000003	GO:GO:0006139	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791
GO:GO:0009987	GO:GO:0048578	ncoils:Coil	PANTHER:PTHR33873	PANTHER:PTHR33873:SF4	SEG:seg
UniParc:UPI00025478A3	UniProt:M4CKF6	MapMan:15.5.36	:	:	:

Description

AT2G42400 (E=8e-181) VOZ2, ATVOZ2 | VOZ2 (VASCULAR PLANT ONE ZINC FINGER PROTEIN 2); transcription activator

Coordinates

chrA05:-:1370482..1372547

Molecular Weight (calculated)

53462.3 Da

IEP (calculated)

5.726

GRAVY (calculated)

-0.690

Length

481 amino acids

Sequence
(BLAST)

001: MSNHPKITCV SSSHQNLVEK LMQLQERFSH LQAARKEGRV NDHAVLEAQI SQNLREWQAE LSAPSPESSL LGGSISQFSE EIARLLKLND EEDDATSSFK
101: EHNVPKADAF DQGLCSPGQL EWAAEPFDQS SFDVNFLSGF EFLVSVSQDA VNNSGTHDHQ LHCAFQEFDP SLSTAPDFHG QKLSHLDITS QLDYHLSEVR
201: QEFNNGTPSV KLDVPDESEF TTPPSVRVPP PSAFLGPKCA LWDCTRPAHG SDWYMDYCSD YHGNLALTED SPGTAPVLRP GGISLKDNLL IDALRAKTLG
301: KNVGSPVCEG AVNTKCPWNA AELFHLELVE GETIREWLFF DKPRRAYDSG NRKQRSLPDY SGRGWHESRK QLMKEQEGQK RSYYMDPQPP GPFEWHLFEY
401: QINESDACAL YRLELKLTNG KKSPKGKVAK DPLADLEKKM EKMGKLTPEA ASDKPSPTTK GRAKSTKGAK AAATGNLTQA T

Best Arabidopsis Sequence Match ( AT2G42400.1 )
(BLAST)

001: MSNHPKITSA HQNVEEKLRE LQERFCHLQA ARKEGRHGDL ALLEAQISQN IREWQAELTA PSPESSLLGE GISQFLEEFA PLLKLDEEDD ATSTLKEHAG
101: AKPDPEGFSQ SLCPPEWTSE NFSQSPFNGN FSCGFEDALN STETHGQQLH YGYEGFDPSI NSAPDFHDQK LSSNLDITSQ YDYIFSEVRQ ELDNSPSTKL
201: DSSEEIDNFA EFSTPSSVRV PPSAFLGPKC ALWDCTRPAQ GSEWYLDYCS NYHGTLALNE DSPGTAPVLR PGGISLKDNL LIDALRAKTQ GKNVGIPVCE
301: GAVNTKCPWN AAELFHLELV EGETIREWLF FDKPRRAYDS GNRKQRSLPD YSGRGWHESR KQLMKEQEGQ KRSYYMDPQP PGPFEWHLFE YQINESDACA
401: LYRLELKVGN GKKSPKGKIS KDPLADLQKK MGQFKVASDK PSPPTKGRKE

Arabidopsis Description

VOZ2VOZ2 [Source:UniProtKB/TrEMBL;Acc:A0A178VSV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.