Factsheet for Zm00001d038704_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000219_P001
Zm00001d024238_P001
Zm00001d025231_P001
Zm00001d028905_P001
Zm00001d047632_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42400.1	Zm00001d000219_P001	AT2G18790.1	22904146
AT2G42400.1	Zm00001d024238_P001	AT2G18790.1	22904146
AT2G42400.1	Zm00001d025231_P001	AT2G18790.1	22904146
AT2G42400.1	Zm00001d028905_P001	AT2G18790.1	22904146
AT2G42400.1	Zm00001d047632_P001	AT2G18790.1	22904146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18506	Sorghum	nucleus, plastid	90.89	90.15
Zm00001d022145_P001	Maize	cytosol	12.58	72.38
HORVU3Hr1G023830.1	Barley	cytosol, plastid	7.45	71.43
HORVU1Hr1G076620.2	Barley	nucleus	62.91	64.63
TraesCS1B01G349200.1	Wheat	nucleus	62.58	64.51
Os05t0515700-01	Rice	nucleus	68.38	64.43
TraesCS1D01G338300.2	Wheat	nucleus	62.09	64.32
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	8.61	63.41
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	8.11	61.25
Zm00001d041158_P001	Maize	cytosol	31.13	60.84
Zm00001d043500_P006	Maize	mitochondrion	54.97	60.47
TraesCS1A01G335900.1	Wheat	nucleus	53.97	59.93
KRH50133	Soybean	cytosol, nucleus, plastid	41.23	52.2
HORVU6Hr1G038800.6	Barley	nucleus	8.77	51.96
KRH20362	Soybean	cytosol, nucleus, plastid	41.06	51.88
Zm00001d012734_P002	Maize	cytosol	55.79	51.61
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	9.27	51.38
VIT_10s0003g00500.t01	Wine grape	nucleus	40.73	50.72
HORVU7Hr1G111470.1	Barley	nucleus	6.62	50.63
KRH30880	Soybean	cytosol	38.24	50.33
PGSC0003DMT400081241	Potato	cytosol	38.58	49.89
KRH32695	Soybean	cytosol	38.41	49.89
CDY34095	Canola	nucleus	39.07	49.68
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	38.41	49.68
Zm00001d045641_P001	Maize	cytosol	31.79	49.61
PGSC0003DMT400058735	Potato	cytosol	27.15	49.55
GSMUA_Achr1P27380_001	Banana	cytosol	23.01	49.29
Bra010864.1-P	Field mustard	nucleus	37.25	49.13
CDY30817	Canola	nucleus	39.24	49.07
CDX90157	Canola	nucleus	37.09	49.02
AT1G28520.2	Thale cress	nucleus	39.4	48.97
CDY35753	Canola	nucleus	36.92	48.69
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	37.25	47.17
VIT_12s0028g02670.t01	Wine grape	mitochondrion, nucleus	40.4	46.12
HORVU6Hr1G038750.11	Barley	nucleus	13.08	43.41
AT2G42400.1	Thale cress	nucleus	31.62	42.44
GSMUA_Achr4P15020_001	Banana	nucleus	43.54	42.35
HORVU4Hr1G057220.1	Barley	nucleus	12.58	41.76
KRH55846	Soybean	nucleus	32.95	41.63
Bra032913.1-P	Field mustard	mitochondrion, plastid	38.91	41.37
KRH25675	Soybean	nucleus	32.45	40.92
Zm00001d047167_P003	Maize	plastid	7.28	40.74
CDX79871	Canola	nucleus	31.29	39.96
Bra016879.1-P	Field mustard	nucleus	31.95	39.88
CDY14829	Canola	nucleus	31.95	39.71
CDY64518	Canola	nucleus	30.63	39.45
Bra004691.1-P	Field mustard	nucleus	31.29	39.29
CDY47967	Canola	nucleus	31.29	39.05
GSMUA_Achr6P22210_001	Banana	nucleus	34.6	38.92
HORVU2Hr1G109410.1	Barley	mitochondrion	11.26	37.78

Protein Annotations

MapMan:15.5.36	EntrezGene:542193	ProteinID:AQK87606.1	UniProt:B4FR91	EMBL:BT039629	GO:GO:0000003
GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0048578	EMBL:HQ858765	PANTHER:PTHR33873
PANTHER:PTHR33873:SF3	UniParc:UPI00017B7E75	EnsemblPlantsGene:Zm00001d038704	EnsemblPlants:Zm00001d038704_P002	EnsemblPlants:Zm00001d038704_T002	SEG:seg

Description

VOZ-transcription factor 2Transcription factor VOZ1

Coordinates

chr6:+:163076812..163080204

Molecular Weight (calculated)

66358.8 Da

IEP (calculated)

6.100

GRAVY (calculated)

-0.737

Length

604 amino acids

Sequence
(BLAST)

001: MAGDPAAGVG GNAHPASGSK SSRSSTRHRQ FRDRAKVRVD DLQEMFCGLQ SARKESRSAD AAVLEEQVHQ MLREWRAELS VPSPASSLQN SQGNNREASD
101: PPSDTLRLLQ LAVPEEEDDA SSKLLVPPSR QTHEHGQDSR MANTDQQCEA IDGGTAPAQH SLGQGVDGDC GEVSSVANAM FNHRMYYTDY ELNIDDFLCG
201: DGYKINISGS NEDQFNNLHG IGQLGHQQFD LPLDLPPTHS YADANNSEQN TGDVFVHMSD LLTTIWPSPS QYLGPKCALW DCGRPAGGTE DSGDYCNPYH
301: AGLALNDDGL LGIRPVMRPR GIDLKDGPLF AALIAKVQGK NVGIPVCGGA ATSKSPWNAP ELFDLSLLEG ESLREWLFFD TPRRAFESGN RKQRSLPDYG
401: GRGWHESRKL VMKDFAGLKR SYYMDPQPSS SHEWHLFEYE INASDALALY RLEYKSSDPK KGAAKSKLAS PLNEIRQRMG RLTADSPVEN KRTARSKPKA
501: NQNQKDTNAN TRPHVNTPNQ VNAPNAYQTT QQVNQMAFLN GNVVYGPHLP HSESVVYGPH LPHSENVVYG PHLPHSENVV YGPHLPQGYS AEGSSFFWNP
601: SDGT

Best Arabidopsis Sequence Match ( AT1G28520.1 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.