CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20362	Soybean	cytosol, nucleus, plastid	97.69	97.49
KRH32695	Soybean	cytosol	79.45	81.51
KRH30880	Soybean	cytosol	78.41	81.48
VIT_10s0003g00500.t01	Wine grape	nucleus	78.83	77.53
Bra010864.1-P	Field mustard	nucleus	70.02	72.93
CDY35753	Canola	nucleus	69.6	72.49
CDX90157	Canola	nucleus	69.18	72.21
CDY34095	Canola	nucleus	71.49	71.79
AT1G28520.2	Thale cress	nucleus	72.54	71.19
CDY30817	Canola	nucleus	71.91	71.01
PGSC0003DMT400058735	Potato	cytosol	48.01	69.18
PGSC0003DMT400081241	Potato	cytosol	66.04	67.45
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	65.83	67.24
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	67.09	67.09
Bra032913.1-P	Field mustard	mitochondrion, plastid	71.7	60.21
Zm00001d022145_P001	Maize	cytosol	13.0	59.05
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	58.07	54.64
GSMUA_Achr1P27380_001	Banana	cytosol	32.08	54.26
KRH55846	Soybean	nucleus	51.99	51.88
KRH25675	Soybean	nucleus	51.78	51.57
Zm00001d041158_P001	Maize	cytosol	33.12	51.13
Os01t0753000-01	Rice	cytosol	52.2	46.63
Zm00001d043500_P006	Maize	mitochondrion	52.83	45.9
GSMUA_Achr4P15020_001	Banana	nucleus	59.75	45.89
Zm00001d045641_P001	Maize	cytosol	37.11	45.74
TraesCS3D01G291600.1	Wheat	mitochondrion	51.99	45.5
TraesCS3B01G326500.4	Wheat	mitochondrion	52.62	43.58
TraesCS1A01G335900.1	Wheat	nucleus	49.27	43.2
TraesCS1D01G338300.2	Wheat	nucleus	51.57	42.2
TraesCS1B01G349200.1	Wheat	nucleus	51.78	42.15
EES18506	Sorghum	nucleus, plastid	53.04	41.54
GSMUA_Achr6P22210_001	Banana	nucleus	46.75	41.53
HORVU1Hr1G076620.2	Barley	nucleus	51.15	41.5
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.45	41.27
Zm00001d038704_P002	Maize	plastid	52.2	41.23
KXG33380	Sorghum	mitochondrion	53.88	40.16
Os05t0515700-01	Rice	nucleus	52.62	39.16
TraesCS3A01G291900.1	Wheat	nucleus	52.41	39.12
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	6.71	39.02
HORVU3Hr1G072260.1	Barley	plastid	53.25	38.66
Zm00001d012734_P002	Maize	cytosol	52.41	38.28
GSMUA_Achr10P...	Banana	plasma membrane	60.8	37.76
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	6.29	37.5
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	8.39	36.7
HORVU7Hr1G111470.1	Barley	nucleus	5.87	35.44
HORVU6Hr1G038800.6	Barley	nucleus	7.55	35.29
HORVU2Hr1G109410.1	Barley	mitochondrion	11.74	31.11
HORVU6Hr1G038750.11	Barley	nucleus	11.74	30.77
HORVU4Hr1G057220.1	Barley	nucleus	11.11	29.12

Protein Annotations

EntrezGene:100798565	MapMan:15.5.36	EMBL:ACUP02004664	EnsemblPlantsGene:GLYMA_07G202700	GO:GO:0000003	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009791	GO:GO:0009987	GO:GO:0048578	UniProt:I1KLR2	EnsemblPlants:KRH50133	ProteinID:KRH50133
ProteinID:KRH50133.1	ProteinID:KRH50134.1	ProteinID:KRH50135.1	PANTHER:PTHR33873	PANTHER:PTHR33873:SF1	UniParc:UPI00023381F3
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:37189174..37193890

Molecular Weight (calculated)

53121.4 Da

IEP (calculated)

6.237

GRAVY (calculated)

-0.609

Length

477 amino acids

Sequence
(BLAST)

001: MKKVPKNSCK SASHRLFKDK AKNRVDDLQL MFLDLQFARK ESRTVDAVVL EEQVHQMLRE WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA
101: SSPLAAPKPE PNDQTLQAGG KVMFQEGQQQ HYFPLVDECK HSTSSVQNVA ANNPDGHALE YHQFDLHQDY DHGLYTGFNG TGYCEEDAIP HISSYLPSIC
201: PPPSAFLGPK CALWDCPRPA QGLDWCQDYC SSFHAALALN EGPPGMAPVL RPGGIGLKDN LLFAALSAKA QGKDVGIPEC EGAATAKSPW NAPELFDLSV
301: LEGETIREWL FFDKPRRAFE SGNRKQRSLP DYSGRGWHES RKQVMNEFGG LKRSYYMDPQ PLNHFEWHLY EYEISKCDAC ALYRLELKLV DGKKNSKTKA
401: ANDSVADLQK QMGRLSAEFP HDNKRAAKGR AKINAKVGIG GVYPASHRVT PLNGTYEYGL AAPYDYLVDN MGDYYGT

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.