CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30817	Canola	nucleus	97.89	96.27
CDY35753	Canola	nucleus	86.32	89.52
CDX90157	Canola	nucleus	85.68	89.06
AT1G28520.2	Thale cress	nucleus	90.74	88.68
Bra032913.1-P	Field mustard	mitochondrion, plastid	97.89	81.87
KRH50133	Soybean	cytosol, nucleus, plastid	71.79	71.49
VIT_10s0003g00500.t01	Wine grape	nucleus	72.63	71.13
KRH20362	Soybean	cytosol, nucleus, plastid	71.58	71.13
KRH30880	Soybean	cytosol	65.26	67.54
PGSC0003DMT400058735	Potato	cytosol	46.53	66.77
KRH32695	Soybean	cytosol	64.63	66.02
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	64.21	63.94
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	61.89	62.95
PGSC0003DMT400081241	Potato	cytosol	61.05	62.1
Zm00001d022145_P001	Maize	cytosol	13.47	60.95
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	57.26	53.65
GSMUA_Achr1P27380_001	Banana	cytosol	31.37	52.84
Zm00001d041158_P001	Maize	cytosol	31.79	48.87
CDX79871	Canola	nucleus	47.16	47.36
CDY64518	Canola	nucleus	46.53	47.12
CDY14829	Canola	nucleus	47.16	46.09
Zm00001d045641_P001	Maize	cytosol	37.05	45.48
CDY47967	Canola	nucleus	46.32	45.45
GSMUA_Achr4P15020_001	Banana	nucleus	57.89	44.28
Os01t0753000-01	Rice	cytosol	49.05	43.63
Zm00001d043500_P006	Maize	mitochondrion	49.68	42.99
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.68	42.86
TraesCS3D01G291600.1	Wheat	mitochondrion	49.05	42.75
TraesCS1A01G335900.1	Wheat	nucleus	48.42	42.28
TraesCS3B01G326500.4	Wheat	mitochondrion	49.47	40.8
HORVU1Hr1G076620.2	Barley	nucleus	49.89	40.31
TraesCS1D01G338300.2	Wheat	nucleus	49.05	39.97
GSMUA_Achr6P22210_001	Banana	nucleus	45.05	39.85
EES18506	Sorghum	nucleus, plastid	50.74	39.57
TraesCS1B01G349200.1	Wheat	nucleus	48.63	39.42
Zm00001d038704_P002	Maize	plastid	49.68	39.07
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	6.53	37.8
KXG33380	Sorghum	mitochondrion	50.53	37.5
Os05t0515700-01	Rice	nucleus	50.53	37.44
TraesCS3A01G291900.1	Wheat	nucleus	49.47	36.78
Zm00001d012734_P002	Maize	cytosol	49.89	36.29
GSMUA_Achr10P...	Banana	plasma membrane	58.32	36.07
HORVU3Hr1G072260.1	Barley	plastid	49.68	35.92
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	5.89	35.0
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	7.79	33.95
HORVU6Hr1G038800.6	Barley	nucleus	6.95	32.35
HORVU7Hr1G111470.1	Barley	nucleus	5.26	31.65
HORVU2Hr1G109410.1	Barley	mitochondrion	11.16	29.44
HORVU6Hr1G038750.11	Barley	nucleus	11.16	29.12
HORVU4Hr1G057220.1	Barley	nucleus	10.95	28.57

Protein Annotations

EnsemblPlants:CDY34095	EnsemblPlantsGene:GSBRNA2T00056021001	GO:GO:0000003	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987
GO:GO:0048578	PANTHER:PTHR33873	PANTHER:PTHR33873:SF1	ProteinID:CDY34095	ProteinID:CDY34095.1	UniParc:UPI0004EEC7CC
UniProt:A0A078H6A9	MapMan:15.5.36	:	:	:	:

Description

BnaA09g27210DBnaA09g27210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6A9]

Coordinates

chrLK032328:-:257918..260615

Molecular Weight (calculated)

53233.5 Da

IEP (calculated)

5.395

GRAVY (calculated)

-0.659

Length

475 amino acids

Sequence
(BLAST)

001: MTGKRSKITC RSTSHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRGVDVTL LEEQVNQMLR EWKSELNEPS PASSLQQEQG GTLGSFSTDI CRLLQLCDEE
101: DDATSKLAPP KPEPTTDQNL EAGKAAVFQR GYNLVQEKSE NEFPLADHGN NFDGTAHLDY NQYDLQQEFE PNFNGGFNEC PTYGPLHISA FIPTICPPPS
201: AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE LFDLTVLESE
301: TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MNEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVVDGK KNSKGKVSTD
401: SVADLQKQMG RLTAEFPQEN VNNKRCIKGR PKVNTKVAAT TTGNVQNTVV EQGNEYGVGE EFNYLVGNLT DYYLP

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.