Factsheet for Solyc10g008880.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058735	Potato	cytosol	66.25	95.47
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	77.78	79.44
VIT_10s0003g00500.t01	Wine grape	nucleus	69.18	68.04
KRH50133	Soybean	cytosol, nucleus, plastid	67.09	67.09
KRH20362	Soybean	cytosol, nucleus, plastid	66.88	66.74
Bra010864.1-P	Field mustard	nucleus	62.47	65.07
CDY35753	Canola	nucleus	62.26	64.85
CDX90157	Canola	nucleus	62.05	64.77
CDY34095	Canola	nucleus	63.94	64.21
AT1G28520.2	Thale cress	nucleus	65.41	64.2
CDY30817	Canola	nucleus	64.78	63.98
KRH30880	Soybean	cytosol	60.8	63.18
KRH32695	Soybean	cytosol	61.22	62.8
Zm00001d022145_P001	Maize	cytosol	12.37	56.19
Bra032913.1-P	Field mustard	mitochondrion, plastid	63.94	53.7
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	54.3	51.08
Zm00001d041158_P001	Maize	cytosol	32.7	50.49
GSMUA_Achr1P27380_001	Banana	cytosol	28.93	48.94
Zm00001d045641_P001	Maize	cytosol	37.11	45.74
Zm00001d043500_P006	Maize	mitochondrion	51.57	44.81
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.87	44.44
Os01t0753000-01	Rice	cytosol	48.43	43.26
TraesCS3D01G291600.1	Wheat	mitochondrion	49.27	43.12
TraesCS1A01G335900.1	Wheat	nucleus	48.43	42.46
GSMUA_Achr4P15020_001	Banana	nucleus	54.09	41.55
TraesCS3B01G326500.4	Wheat	mitochondrion	49.27	40.8
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	6.92	40.24
TraesCS1D01G338300.2	Wheat	nucleus	48.64	39.79
HORVU1Hr1G076620.2	Barley	nucleus	48.64	39.46
TraesCS1B01G349200.1	Wheat	nucleus	48.43	39.42
EES18506	Sorghum	nucleus, plastid	49.27	38.59
HORVU7Hr1G111470.1	Barley	nucleus	6.29	37.97
KXG33380	Sorghum	mitochondrion	50.73	37.81
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	6.29	37.5
Os05t0515700-01	Rice	nucleus	50.31	37.44
Zm00001d038704_P002	Maize	plastid	47.17	37.25
Zm00001d012734_P002	Maize	cytosol	50.94	37.21
GSMUA_Achr6P22210_001	Banana	nucleus	41.72	37.06
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	8.39	36.7
TraesCS3A01G291900.1	Wheat	nucleus	49.06	36.62
HORVU3Hr1G072260.1	Barley	plastid	49.69	36.07
HORVU6Hr1G038800.6	Barley	nucleus	7.34	34.31
GSMUA_Achr10P...	Banana	plasma membrane	55.14	34.24
HORVU2Hr1G109410.1	Barley	mitochondrion	11.74	31.11
HORVU6Hr1G038750.11	Barley	nucleus	11.32	29.67
HORVU4Hr1G057220.1	Barley	nucleus	11.11	29.12

Protein Annotations

EnsemblPlants:Solyc10g008880.2.1	EnsemblPlantsGene:Solyc10g008880.2	GO:GO:0000003	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987
GO:GO:0048578	ncoils:Coil	PANTHER:PTHR33873	PANTHER:PTHR33873:SF1	SEG:seg	UniParc:UPI000276BB9D
UniProt:K4CY64	MapMan:15.5.36	:	:	:	:

Description

No Description!

Coordinates

chr10:-:2920272..2924119

Molecular Weight (calculated)

53540.6 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.596

Length

477 amino acids

Sequence
(BLAST)

001: MRKVSKRGAC KSASHQLFKD RAKNRVDDLQ GVLTNLQSAR KESRTYDVGL LEEQVHQMLR EWKSELNEPS PASSLQGGSR VSSSADIYRL LLGEEEDDAT
101: SALAAPKPEP DAQKVSITGF QEGFNVTQVL QEQGFQLVDQ CKGLPLMVNN TGVNNLGIAT QLDYHSFDLH REYDQQYLPG FDALNLCLED AMPPIHISPP
201: PSAFLGPKCA LWDCPRPAMG SDWCQKSQDY CSDYHASLAP NEGYPGRPPV VRPMGIGLKD NLLFQALGAK AHGKEVGVPE CEGAATAKSP WNAPELFDLK
301: VVEGEVIREW LFFDKPRRAF ESGNRKQRSL PDYNGRGWHE SRKQMMNEFG GLKRSYYMDP QPMKNLEWHL YEYEINKYDA CALYRLELKL VDGKKIPKGK
401: ISNVSVADLQ KQMGRLTAEF PLDNKRTVKG RVKANMKNMG NIHAAPVPIV PIGEGFDYGN TDPYDYLLDD LDGYFIT

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.