Factsheet for VIT_10s0003g00500.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20362	Soybean	cytosol, nucleus, plastid	77.73	78.87
KRH50133	Soybean	cytosol, nucleus, plastid	77.53	78.83
KRH30880	Soybean	cytosol	70.72	74.73
KRH32695	Soybean	cytosol	70.72	73.76
CDY34095	Canola	nucleus	71.13	72.63
Bra010864.1-P	Field mustard	nucleus	68.45	72.49
CDY30817	Canola	nucleus	71.96	72.26
CDX90157	Canola	nucleus	68.04	72.21
CDY35753	Canola	nucleus	68.04	72.05
AT1G28520.2	Thale cress	nucleus	72.16	72.02
PGSC0003DMT400058735	Potato	cytosol	47.63	69.79
VIT_12s0028g02670.t01	Wine grape	mitochondrion, nucleus	75.88	69.57
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	66.8	69.38
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	68.04	69.18
PGSC0003DMT400081241	Potato	cytosol	66.39	68.95
Bra032913.1-P	Field mustard	mitochondrion, plastid	70.52	60.21
Zm00001d022145_P001	Maize	cytosol	12.99	60.0
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	59.18	56.61
GSMUA_Achr1P27380_001	Banana	cytosol	32.58	56.03
Zm00001d041158_P001	Maize	cytosol	32.37	50.81
GSMUA_Achr4P15020_001	Banana	nucleus	61.03	47.67
Os01t0753000-01	Rice	cytosol	51.34	46.63
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.98	46.03
Zm00001d045641_P001	Maize	cytosol	36.7	45.99
Zm00001d043500_P006	Maize	mitochondrion	51.96	45.9
TraesCS3D01G291600.1	Wheat	mitochondrion	51.13	45.5
TraesCS1A01G335900.1	Wheat	nucleus	49.07	43.75
TraesCS3B01G326500.4	Wheat	mitochondrion	51.34	43.23
HORVU1Hr1G076620.2	Barley	nucleus	51.13	42.18
GSMUA_Achr6P22210_001	Banana	nucleus	46.6	42.09
TraesCS1D01G338300.2	Wheat	nucleus	50.31	41.85
EES18506	Sorghum	nucleus, plastid	52.16	41.54
TraesCS1B01G349200.1	Wheat	nucleus	50.1	41.47
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	7.01	41.46
Zm00001d038704_P002	Maize	plastid	50.72	40.73
KXG33380	Sorghum	mitochondrion	53.4	40.47
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	6.6	40.0
Zm00001d012734_P002	Maize	cytosol	52.58	39.05
TraesCS3A01G291900.1	Wheat	nucleus	51.34	38.97
Os05t0515700-01	Rice	nucleus	51.34	38.85
GSMUA_Achr10P...	Banana	plasma membrane	61.24	38.67
HORVU3Hr1G072260.1	Barley	plastid	52.37	38.66
HORVU7Hr1G111470.1	Barley	nucleus	6.19	37.97
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	8.25	36.7
HORVU6Hr1G038800.6	Barley	nucleus	7.42	35.29
HORVU6Hr1G038750.11	Barley	nucleus	11.55	30.77
HORVU2Hr1G109410.1	Barley	mitochondrion	11.34	30.56
HORVU4Hr1G057220.1	Barley	nucleus	11.34	30.22

Protein Annotations

EntrezGene:100243518	wikigene:100243518	MapMan:15.5.36	ProteinID:CCB55639	ProteinID:CCB55639.1	ncoils:Coil
UniProt:F6HM51	EMBL:FN595992	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009414	GO:GO:0009605	GO:GO:0009607
GO:GO:0009628	GO:GO:0009631	GO:GO:0009791	GO:GO:0009816	GO:GO:0009987	GO:GO:0043565
GO:GO:0045893	GO:GO:0048574	GO:GO:0048578	EntrezGene:LOC100243518	wikigene:LOC100243518	PANTHER:PTHR33873
PANTHER:PTHR33873:SF1	UniParc:UPI0001984117	ArrayExpress:VIT_10s0003g00500	EnsemblPlantsGene:VIT_10s0003g00500	EnsemblPlants:VIT_10s0003g00500.t01	unigene:Vvi.7055
RefSeq:XP_002273268	RefSeq:XP_002273268.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:+:1754245..1758276

Molecular Weight (calculated)

53671.2 Da

IEP (calculated)

5.662

GRAVY (calculated)

-0.600

Length

485 amino acids

Sequence
(BLAST)

001: MMGKGSKSNC KSASHKMFKD KAKNRVDDLQ GMFTDLQSAR KESRSVDVAV LEEQLHQMLR EWKAELNEPS PASSLQGGSL GSFSSDICRL LQLCEEEDDA
101: TSALADGAVP KPEPDAQGHQ IGASVLFQER YNKGPQEHGF QLVDQCKISP SGAHNMGVHN LEGATQLDYR QFDLQQDFEQ NFFAGYDGTG LCGEDAMPHI
201: SSFLPSICLP PSAFLGPKCA LWDCPRPAQG MDWCQNYCSS FHATLALSEG PPGMTPVLRP GGIGLKDGLL FAALSAKVQG KDVGIPECEG AATAKSPWNA
301: PELFDLSVLE GETIREWLFF DKPRRAFESG NRKQRSLPDY SGRGWHESRK QVMNEYGGLK RSYYMDPQPL NHFEWHLYEY EISKCDACAL YRLELKLVDG
401: KKSSKAKATT DSVADLQKQM GRLTAEFPLD NKRSVKGRTK INMKDGVGDV YSTPNRVGPP NQQGDYGVGG PYDYLVENLG DYYLT

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.