Factsheet for PGSC0003DMT400058735

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	95.47	66.25
PGSC0003DMT400081241	Potato	cytosol	81.27	57.6
Zm00001d022145_P001	Maize	cytosol	17.82	56.19
Zm00001d041158_P001	Maize	cytosol	47.13	50.49
KRH50133	Soybean	cytosol, nucleus, plastid	69.18	48.01
KRH20362	Soybean	cytosol, nucleus, plastid	69.18	47.91
VIT_10s0003g00500.t01	Wine grape	nucleus	69.79	47.63
Bra010864.1-P	Field mustard	nucleus	65.86	47.6
CDX90157	Canola	nucleus	65.26	47.26
CDY35753	Canola	nucleus	65.26	47.16
CDY34095	Canola	nucleus	66.77	46.53
CDY30817	Canola	nucleus	66.47	45.55
AT1G28520.2	Thale cress	nucleus	66.47	45.27
KRH30880	Soybean	cytosol	62.24	44.88
KRH32695	Soybean	cytosol	61.93	44.09
Zm00001d045641_P001	Maize	cytosol	48.64	41.6
Bra032913.1-P	Field mustard	mitochondrion, plastid	66.77	38.91
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	58.91	38.46
Os01t0753000-01	Rice	cytosol	55.59	34.46
Zm00001d043500_P006	Maize	mitochondrion	55.89	33.7
TraesCS3D01G291600.1	Wheat	mitochondrion	53.17	32.29
TraesCS1A01G335900.1	Wheat	nucleus	51.36	31.25
TraesCS3B01G326500.4	Wheat	mitochondrion	53.17	30.56
GSMUA_Achr4P15020_001	Banana	nucleus	55.89	29.79
TraesCS1D01G338300.2	Wheat	nucleus	51.36	29.16
HORVU1Hr1G076620.2	Barley	nucleus	51.36	28.91
GSMUA_Achr1P27380_001	Banana	cytosol	24.47	28.72
KXG33380	Sorghum	mitochondrion	55.29	28.59
TraesCS1B01G349200.1	Wheat	nucleus	50.45	28.5
EES18506	Sorghum	nucleus, plastid	51.96	28.24
Zm00001d012734_P002	Maize	cytosol	54.98	27.87
TraesCS3A01G291900.1	Wheat	nucleus	53.78	27.86
HORVU3Hr1G072260.1	Barley	plastid	54.38	27.4
Zm00001d038704_P002	Maize	plastid	49.55	27.15
Os05t0515700-01	Rice	nucleus	51.96	26.83
GSMUA_Achr10P...	Banana	plasma membrane	60.73	26.17
GSMUA_Achr6P22210_001	Banana	nucleus	38.37	23.65
HORVU2Hr1G109410.1	Barley	mitochondrion	8.76	16.11
HORVU6Hr1G038750.11	Barley	nucleus	7.25	13.19
HORVU4Hr1G057220.1	Barley	nucleus	7.25	13.19
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	3.32	10.09
HORVU7Hr1G111470.1	Barley	nucleus	2.11	8.86
HORVU6Hr1G038800.6	Barley	nucleus	1.21	3.92
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	0.91	3.66
HORVU3Hr1G023830.1	Barley	cytosol, plastid	0.3	1.59
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	0.3	1.25

Protein Annotations

EnsemblPlants:PGSC0003DMT400058735	EnsemblPlantsGene:PGSC0003DMG400022817	GO:GO:0000003	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987
GO:GO:0048578	PANTHER:PTHR33873	PANTHER:PTHR33873:SF1	PGSC:PGSC0003DMG400022817	UniParc:UPI000294D1AD	UniProt:M1C378
MapMan:15.5.36	:	:	:	:	:

Description

MdVOZ1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400022817]

Coordinates

chr10:-:4503349..4507499

Molecular Weight (calculated)

37446.5 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.558

Length

331 amino acids

Sequence
(BLAST)

001: MVNNTGVNNL GIATQLDYHS FDLHHEYDQQ YLPGFDALNL CLEDAMPPIH ISPPPSAFLG PKCALWDCPR PAMGSDWCQK SQDYCSDYHA SLAPNEGYPG
101: RPPVVRPMGI GLKDNLLFQA LSAKAHGKDV GVPECEGAAT AKSPWNAPEL FDLKVVEGEI IREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQMM
201: NEFGGLKRSY YMDPQPMKNL EWHLYEYEIN KYDACALYRL ELKLVDGKKI PKGKISNVSV ADLQKQMGRL TAEFPLDNKR TVKGRVKANM KYVGNIHAAP
301: VPIVPTCEGF DYGNSDPYDY LVDDLDGYFI T

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.