CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50133	Soybean	cytosol, nucleus, plastid	97.49	97.69
KRH30880	Soybean	cytosol	78.03	81.26
KRH32695	Soybean	cytosol	78.87	81.08
VIT_10s0003g00500.t01	Wine grape	nucleus	78.87	77.73
Bra010864.1-P	Field mustard	nucleus	69.87	72.93
CDY35753	Canola	nucleus	69.46	72.49
CDX90157	Canola	nucleus	69.04	72.21
CDY34095	Canola	nucleus	71.13	71.58
AT1G28520.2	Thale cress	nucleus	72.18	70.99
CDY30817	Canola	nucleus	71.55	70.81
PGSC0003DMT400058735	Potato	cytosol	47.91	69.18
PGSC0003DMT400081241	Potato	cytosol	65.9	67.45
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	65.48	67.02
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	66.74	66.88
Bra032913.1-P	Field mustard	mitochondrion, plastid	71.34	60.04
Zm00001d022145_P001	Maize	cytosol	12.97	59.05
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	58.58	55.23
GSMUA_Achr1P27380_001	Banana	cytosol	32.22	54.61
Zm00001d041158_P001	Maize	cytosol	33.26	51.46
KRH55846	Soybean	nucleus	50.84	50.84
KRH25675	Soybean	nucleus	50.84	50.73
Os01t0753000-01	Rice	cytosol	52.3	46.82
GSMUA_Achr4P15020_001	Banana	nucleus	60.25	46.38
Zm00001d043500_P006	Maize	mitochondrion	53.14	46.27
Zm00001d045641_P001	Maize	cytosol	37.03	45.74
TraesCS3D01G291600.1	Wheat	mitochondrion	51.26	44.95
TraesCS1A01G335900.1	Wheat	nucleus	49.37	43.38
TraesCS3B01G326500.4	Wheat	mitochondrion	52.09	43.23
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.65	42.86
TraesCS1D01G338300.2	Wheat	nucleus	51.46	42.2
TraesCS1B01G349200.1	Wheat	nucleus	51.67	42.15
GSMUA_Achr6P22210_001	Banana	nucleus	46.86	41.71
EES18506	Sorghum	nucleus, plastid	53.14	41.71
HORVU1Hr1G076620.2	Barley	nucleus	51.05	41.5
Zm00001d038704_P002	Maize	plastid	51.88	41.06
KXG33380	Sorghum	mitochondrion	54.18	40.47
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	6.9	40.24
Os05t0515700-01	Rice	nucleus	52.51	39.16
TraesCS3A01G291900.1	Wheat	nucleus	51.88	38.81
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	6.49	38.75
Zm00001d012734_P002	Maize	cytosol	52.93	38.74
HORVU3Hr1G072260.1	Barley	plastid	52.93	38.51
GSMUA_Achr10P...	Banana	plasma membrane	60.88	37.89
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	8.58	37.61
HORVU7Hr1G111470.1	Barley	nucleus	6.07	36.71
HORVU6Hr1G038800.6	Barley	nucleus	7.74	36.27
HORVU2Hr1G109410.1	Barley	mitochondrion	11.92	31.67
HORVU6Hr1G038750.11	Barley	nucleus	11.92	31.32
HORVU4Hr1G057220.1	Barley	nucleus	11.3	29.67

Protein Annotations

EntrezGene:100806521	MapMan:15.5.36	EMBL:ACUP02008255	EMBL:ACUP02008256	EnsemblPlantsGene:GLYMA_13G172900	GO:GO:0000003
GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0048578	UniProt:I1M050	EnsemblPlants:KRH20362
ProteinID:KRH20362	ProteinID:KRH20362.1	PANTHER:PTHR33873	PANTHER:PTHR33873:SF1	UniParc:UPI000233B685	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:28697100..28703351

Molecular Weight (calculated)

53353.5 Da

IEP (calculated)

6.001

GRAVY (calculated)

-0.629

Length

478 amino acids

Sequence
(BLAST)

001: MKKVPKNSCK SASHRLFKDK AKNRVDDLQL MFLDLQFARK ESRTVDAAVL EEQVHQMLRE WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA
101: SSQLAAPKPE PNDQTLQVGG KVMFQEGQQQ HDFPFVDECK HFTSSVQNVA ANNPDGHDLE YHQFDLHQDY DHGFYTGFNG TGYCEEDAIP HISSYLPSIC
201: PPPSAFLGPK CALWDCPRPA QGLDWCQDYC SSFHAALALN EGPPGMAPVL RPGGIGLKDN LLFAALSAKA QGKDVGIPEC EGAATAKSPW NAPELFDLSV
301: LEGETIREWL FFDKPRRAFE SGNRKQRSLP DYSGRGWHES RKQVMNEFGG LKRSYYMDPQ PLNHFEWHLY EYEISKCDAC ALYRLELKLV DGKKNSKTKA
401: ANDSVADLQK QMGRLSAEFP HDNKRAAKGR AKINTKVGIG GGVYSASHRV TPLNGTYEYG LAAPYDYLVD NMGDYYGT

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.