Factsheet for Solyc02g077450.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081241	Potato	cytosol	93.36	93.36
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	79.44	77.78
VIT_10s0003g00500.t01	Wine grape	nucleus	69.38	66.8
KRH50133	Soybean	cytosol, nucleus, plastid	67.24	65.83
KRH20362	Soybean	cytosol, nucleus, plastid	67.02	65.48
Bra010864.1-P	Field mustard	nucleus	61.88	63.1
CDY35753	Canola	nucleus	61.88	63.1
CDX90157	Canola	nucleus	61.67	63.02
KRH30880	Soybean	cytosol	61.67	62.75
AT1G28520.2	Thale cress	nucleus	64.67	62.14
CDY34095	Canola	nucleus	62.95	61.89
KRH32695	Soybean	cytosol	61.24	61.51
CDY30817	Canola	nucleus	63.38	61.28
Zm00001d022145_P001	Maize	cytosol	12.42	55.24
Bra032913.1-P	Field mustard	mitochondrion, plastid	63.17	51.94
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	54.18	49.9
Zm00001d041158_P001	Maize	cytosol	32.98	49.84
GSMUA_Achr1P27380_001	Banana	cytosol	28.48	47.16
Zm00001d045641_P001	Maize	cytosol	37.69	45.48
Zm00001d043500_P006	Maize	mitochondrion	52.03	44.26
Os01t0753000-01	Rice	cytosol	50.32	44.01
TraesCS3D01G291600.1	Wheat	mitochondrion	51.18	43.85
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.78	42.86
TraesCS1A01G335900.1	Wheat	nucleus	49.25	42.28
TraesCS3B01G326500.4	Wheat	mitochondrion	50.54	40.97
GSMUA_Achr4P15020_001	Banana	nucleus	53.1	39.94
TraesCS1D01G338300.2	Wheat	nucleus	49.68	39.79
HORVU1Hr1G076620.2	Barley	nucleus	49.89	39.63
TraesCS1B01G349200.1	Wheat	nucleus	49.68	39.59
EES18506	Sorghum	nucleus, plastid	50.96	39.08
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	6.85	39.02
Zm00001d038704_P002	Maize	plastid	49.68	38.41
KXG33380	Sorghum	mitochondrion	52.25	38.12
Os05t0515700-01	Rice	nucleus	52.25	38.07
HORVU7Hr1G111470.1	Barley	nucleus	6.42	37.97
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	6.42	37.5
TraesCS3A01G291900.1	Wheat	nucleus	50.75	37.09
Zm00001d012734_P002	Maize	cytosol	51.82	37.06
GSMUA_Achr6P22210_001	Banana	nucleus	41.76	36.31
HORVU3Hr1G072260.1	Barley	plastid	50.96	36.23
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	8.14	34.86
GSMUA_Achr10P...	Banana	plasma membrane	55.46	33.72
HORVU6Hr1G038800.6	Barley	nucleus	7.28	33.33
HORVU2Hr1G109410.1	Barley	mitochondrion	11.99	31.11
HORVU4Hr1G057220.1	Barley	nucleus	11.35	29.12
HORVU6Hr1G038750.11	Barley	nucleus	11.13	28.57

Protein Annotations

EnsemblPlants:Solyc02g077450.2.1	EnsemblPlantsGene:Solyc02g077450.2	GO:GO:0000003	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987
GO:GO:0048578	ncoils:Coil	PANTHER:PTHR33873	PANTHER:PTHR33873:SF1	SEG:seg	UniParc:UPI0002767CFC
UniProt:K4B8X1	MapMan:15.5.36	:	:	:	:

Description

No Description!

Coordinates

chr2:-:42384282..42389124

Molecular Weight (calculated)

52085.1 Da

IEP (calculated)

5.077

GRAVY (calculated)

-0.699

Length

467 amino acids

Sequence
(BLAST)

001: MGKGSKNGAL FKDKAKNRVD DLQGMFMNLQ SARKESRTHD AGLLEEQVHQ MLREWKAELN EPSPASSLQG GSRISSDLYR LLHGEEEDDA TSALAAPKPE
101: PDAQKQDVAG FQEDFNATPV MQEQGYQLDD ECKNTPLAVN NAGINNEGVA TQLDYHSFDL QQDFDQFGFD ALNLCLEENL SPIQISPPPS AFLGPKCALW
201: DCPRPAMGSD WCQKSHDYCS DYHAALAPNE GYLGRPPVVR PMGVGLKDSL LFQALSAKAH GKDVGVPECR GAATAKSPWN APELFDLEVV EGETIREWLF
301: FDKPRRAFES GNRKQRSLPD YNGRGWHESR KQVINDYGGL KRSYYMDPQP MKNLEWHLYE YEINKYDAWA LYRLELKLVD GKKSPKGKVM NESVADLQKQ
401: MGRLSADIPL ENKRSVKGRG KANSKDVVTN GPPAPNQTVP AIEGFDYVAG APFPDYLVDN IGGYYIT

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.