CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010864.1-P	Field mustard	nucleus	99.34	99.13
CDY35753	Canola	nucleus	93.87	93.67
CDY34095	Canola	nucleus	89.06	85.68
CDY30817	Canola	nucleus	90.37	85.51
AT1G28520.2	Thale cress	nucleus	88.4	83.13
KRH50133	Soybean	cytosol, nucleus, plastid	72.21	69.18
KRH20362	Soybean	cytosol, nucleus, plastid	72.21	69.04
VIT_10s0003g00500.t01	Wine grape	nucleus	72.21	68.04
KRH30880	Soybean	cytosol	66.08	65.8
PGSC0003DMT400058735	Potato	cytosol	47.26	65.26
KRH32695	Soybean	cytosol	65.43	64.3
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	64.77	62.05
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	63.02	61.67
Zm00001d022145_P001	Maize	cytosol	14.0	60.95
PGSC0003DMT400081241	Potato	cytosol	62.14	60.81
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	56.89	51.28
GSMUA_Achr1P27380_001	Banana	cytosol	31.29	50.71
Zm00001d041158_P001	Maize	cytosol	32.39	47.9
CDY64518	Canola	nucleus	46.83	45.63
CDX79871	Canola	nucleus	47.05	45.45
CDY14829	Canola	nucleus	48.14	45.27
CDY47967	Canola	nucleus	47.05	44.42
Zm00001d045641_P001	Maize	cytosol	37.2	43.93
GSMUA_Achr4P15020_001	Banana	nucleus	58.86	43.32
TraesCS3D01G291600.1	Wheat	mitochondrion	50.98	42.75
Os01t0753000-01	Rice	cytosol	49.45	42.32
Zm00001d043500_P006	Maize	mitochondrion	50.55	42.08
TraesCS1A01G335900.1	Wheat	nucleus	49.67	41.73
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.69	41.27
TraesCS3B01G326500.4	Wheat	mitochondrion	51.64	40.97
GSMUA_Achr6P22210_001	Banana	nucleus	46.17	39.29
TraesCS1D01G338300.2	Wheat	nucleus	50.11	39.28
HORVU1Hr1G076620.2	Barley	nucleus	50.33	39.12
TraesCS1B01G349200.1	Wheat	nucleus	49.45	38.57
EES18506	Sorghum	nucleus, plastid	50.55	37.93
Zm00001d038704_P002	Maize	plastid	49.02	37.09
TraesCS3A01G291900.1	Wheat	nucleus	51.42	36.78
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	6.56	36.59
KXG33380	Sorghum	mitochondrion	50.98	36.41
Os05t0515700-01	Rice	nucleus	50.55	36.04
HORVU3Hr1G072260.1	Barley	plastid	51.42	35.77
GSMUA_Achr10P...	Banana	plasma membrane	59.96	35.68
Zm00001d012734_P002	Maize	cytosol	50.77	35.53
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	5.91	33.75
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	7.66	32.11
HORVU7Hr1G111470.1	Barley	nucleus	5.47	31.65
HORVU6Hr1G038800.6	Barley	nucleus	7.0	31.37
HORVU2Hr1G109410.1	Barley	mitochondrion	11.82	30.0
HORVU6Hr1G038750.11	Barley	nucleus	11.38	28.57
HORVU4Hr1G057220.1	Barley	nucleus	11.16	28.02

Protein Annotations

EnsemblPlants:CDX90157	EnsemblPlantsGene:GSBRNA2T00150696001	ncoils:Coil	PANTHER:PTHR33873	PANTHER:PTHR33873:SF1	ProteinID:CDX90157
ProteinID:CDX90157.1	SEG:seg	UniParc:UPI0004EE8BD9	MapMan:15.5.36	:	:

Description

BnaA08g18270D

Coordinates

chrLK031862:+:397412..399102

Molecular Weight (calculated)

50959.9 Da

IEP (calculated)

5.064

GRAVY (calculated)

-0.606

Length

457 amino acids

Sequence
(BLAST)

001: MTGKRSKNPC RSVSHKLFKD KAKNRVDDLQ GMLLDLQFAR KESSALDVTL LEEQVNLMLR EWKSELNEPS PASSLQQGGG TLGSFSSDIC RLLQLCDEED
101: DATSKLAAPK PEPTDQNLEP YGPLADHRKD PSLVVGNNLD GTAHLEYNLQ QEFEPSFNGG FNDCPGYGVE GPLDISAFIP IICPPPSAFL GPKCALWDCP
201: RPAQGLDWFQ DYCSSFHASL AFNEGPPGMN PVVRPGGIGL KDGLLFAALS AKAGGKDVGI PECEGAATAK SPWNAPELFD LTVLESETLR EWLFFDKPRR
301: AFESGNRKQR SLPDYNGRGW HESRKQIMSE FGGLKRSYYM DPQPLHHFEW HLYEYEINNC DACALYRLEL KLVVDGKNSK GKVSTDSVAD LQKQMRRLTA
401: EFPQENNNNK RCIKGRTKVN TKVATGNVQN TVEQTIEYGV GEEFNYLVGN LTDYYDN

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.