Factsheet for Zm00001d043500_P006

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000219_P001
Zm00001d024238_P001
Zm00001d025231_P001
Zm00001d028905_P001
Zm00001d047632_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42400.1	Zm00001d000219_P001	AT2G18790.1	22904146
AT2G42400.1	Zm00001d024238_P001	AT2G18790.1	22904146
AT2G42400.1	Zm00001d025231_P001	AT2G18790.1	22904146
AT2G42400.1	Zm00001d028905_P001	AT2G18790.1	22904146
AT2G42400.1	Zm00001d047632_P001	AT2G18790.1	22904146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041158_P001	Maize	cytosol	49.18	87.38
Os01t0753000-01	Rice	cytosol	76.68	78.84
KXG33380	Sorghum	mitochondrion	86.16	73.91
TraesCS3D01G291600.1	Wheat	mitochondrion	72.68	73.21
TraesCS3B01G326500.4	Wheat	mitochondrion	73.22	69.79
Zm00001d012734_P002	Maize	cytosol	81.06	68.15
Zm00001d045641_P001	Maize	cytosol	47.91	67.96
TraesCS3A01G291900.1	Wheat	nucleus	72.68	62.44
Zm00001d022145_P001	Maize	cytosol	11.84	61.9
HORVU3Hr1G072260.1	Barley	plastid	73.59	61.49
PGSC0003DMT400058735	Potato	cytosol	33.7	55.89
Zm00001d038704_P002	Maize	plastid	60.47	54.97
KRH20362	Soybean	cytosol, nucleus, plastid	46.27	53.14
KRH50133	Soybean	cytosol, nucleus, plastid	45.9	52.83
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	44.26	52.03
VIT_10s0003g00500.t01	Wine grape	nucleus	45.9	51.96
KRH30880	Soybean	cytosol	43.35	51.85
PGSC0003DMT400081241	Potato	cytosol	44.08	51.82
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	44.81	51.57
KRH32695	Soybean	cytosol	43.17	50.97
CDY35753	Canola	nucleus	42.44	50.87
Bra010864.1-P	Field mustard	nucleus	42.44	50.87
CDX90157	Canola	nucleus	42.08	50.55
CDY34095	Canola	nucleus	42.99	49.68
CDY30817	Canola	nucleus	43.35	49.28
AT1G28520.2	Thale cress	nucleus	43.53	49.18
GSMUA_Achr1P27380_001	Banana	cytosol	25.14	48.94
VIT_12s0028g02670.t01	Wine grape	mitochondrion, nucleus	45.9	47.64
AT2G42400.1	Thale cress	nucleus	37.34	45.56
GSMUA_Achr4P15020_001	Banana	nucleus	51.18	45.25
CDY64518	Canola	nucleus	37.89	44.35
Bra016879.1-P	Field mustard	nucleus	38.98	44.21
CDX79871	Canola	nucleus	37.89	43.97
CDY14829	Canola	nucleus	38.43	43.42
Bra004691.1-P	Field mustard	nucleus	37.7	43.04
CDY47967	Canola	nucleus	37.34	42.36
KRH55846	Soybean	nucleus	36.79	42.26
KRH25675	Soybean	nucleus	36.43	41.75
Bra032913.1-P	Field mustard	mitochondrion, plastid	43.17	41.73
GSMUA_Achr6P22210_001	Banana	nucleus	38.25	39.11
Zm00001d047167_P003	Maize	plastid	6.92	35.19

Protein Annotations

EnsemblPlants:Zm00001d043500_P006	EnsemblPlants:Zm00001d043500_T006	EnsemblPlantsGene:Zm00001d043500	EntrezGene:100280171	GO:GO:0000003	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009791	GO:GO:0009987	GO:GO:0048578	PANTHER:PTHR33873	PANTHER:PTHR33873:SF3	ProteinID:ONM38268.1
ProteinID:ONM38270.1	SEG:seg	UniParc:UPI0008443B7B	UniProt:A0A1D6NCN8	MapMan:15.5.36	:

Description

VOZ-transcription factor 4Transcription factor VOZ1

Coordinates

chr3:-:201984583..201991129

Molecular Weight (calculated)

61430.9 Da

IEP (calculated)

4.895

GRAVY (calculated)

-0.633

Length

549 amino acids

Sequence
(BLAST)

001: MGKVPSSRAG SRHQQFRARA MTRVDDLQEV FSGLQSARKD SRPTDAAILE AQLQQMLREW RSELSAPSPA SSLQGNAREL SDPPSDTLRM LQLAAAEEED
101: DATSKMVEQQ QQPPPPANQN QGHAQVCQDM KREPREEAVD VAVEKPQPLS QGVLLNGAAT ASAVFHDQMY YVNQELTVED FLYDDDYKID LSGSNLDVLN
201: NLEGIVQLEY PQLNLPQELA PNVYIDMSYC GQNAGGVLLH MTDLFTTMTS APSAFLKPKC ALWDCPRPAV GSERWHDYCS MYHADLAVQE EGPPGTMPVI
301: RPRGIDLKDG PLFAALSAKI QGKNVGIPIC EGAATAKSPW NAPELFDLYI FEGESIREWL FFDKPRRAFV SGNRKQRSLP DYGGRGWHES RKQAMKDFGG
401: LKRSYYMDPQ PSNSYEWHLY EYEINECDAF ALYRLEFKSS DAKKIVKSKL ACNPLNEIQQ QMVRLSADSP VDNKRTARGR QHANPTDVDT NIYSVPNTTA
501: QANVPNAYQP GSQVDQMTYL NGSVVYGPHL PYGYSTERSD FYWNSADGT

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.