Factsheet for HORVU3Hr1G072260.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G053400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42400.1	HORVU4Hr1G053400.1	AT2G18790.1	22904146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G291600.1	Wheat	mitochondrion	73.67	88.81
TraesCS3B01G326500.4	Wheat	mitochondrion	75.65	86.28
TraesCS3A01G291900.1	Wheat	nucleus	76.86	79.03
Os01t0753000-01	Rice	cytosol	63.47	78.09
Zm00001d043500_P006	Maize	mitochondrion	61.49	73.59
Zm00001d041158_P001	Maize	cytosol	33.79	71.84
KXG33380	Sorghum	mitochondrion	61.95	63.59
Zm00001d012734_P002	Maize	cytosol	60.27	60.64
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.48	57.14
Zm00001d045641_P001	Maize	cytosol	33.64	57.11
HORVU1Hr1G076620.2	Barley	nucleus	49.32	55.1
PGSC0003DMT400058735	Potato	cytosol	27.4	54.38
KRH50133	Soybean	cytosol, nucleus, plastid	38.66	53.25
KRH20362	Soybean	cytosol, nucleus, plastid	38.51	52.93
VIT_10s0003g00500.t01	Wine grape	nucleus	38.66	52.37
KRH30880	Soybean	cytosol	36.53	52.29
KRH32695	Soybean	cytosol	36.68	51.83
Bra010864.1-P	Field mustard	nucleus	35.92	51.53
CDX90157	Canola	nucleus	35.77	51.42
PGSC0003DMT400081241	Potato	cytosol	36.38	51.18
CDY35753	Canola	nucleus	35.62	51.09
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	36.23	50.96
AT1G28520.2	Thale cress	nucleus	36.83	49.79
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	36.07	49.69
CDY34095	Canola	nucleus	35.92	49.68
GSMUA_Achr1P27380_001	Banana	cytosol	21.31	49.65
CDY30817	Canola	nucleus	36.23	49.28
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	6.09	48.78
VIT_12s0028g02670.t01	Wine grape	mitochondrion, nucleus	38.97	48.39
HORVU7Hr1G111470.1	Barley	nucleus	5.78	48.1
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	5.63	46.25
AT2G42400.1	Thale cress	nucleus	31.2	45.56
KRH55846	Soybean	nucleus	32.27	44.35
GSMUA_Achr4P15020_001	Banana	nucleus	41.7	44.12
KRH25675	Soybean	nucleus	31.81	43.63
Bra032913.1-P	Field mustard	mitochondrion, plastid	36.99	42.78
CDY64518	Canola	nucleus	30.44	42.64
CDX79871	Canola	nucleus	30.44	42.28
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	7.0	42.2
Bra016879.1-P	Field mustard	nucleus	31.05	42.15
CDY14829	Canola	nucleus	31.05	41.98
Bra004691.1-P	Field mustard	nucleus	30.44	41.58
CDY47967	Canola	nucleus	30.14	40.91
HORVU6Hr1G038800.6	Barley	nucleus	6.24	40.2
GSMUA_Achr6P22210_001	Banana	nucleus	32.12	39.29
HORVU6Hr1G038750.11	Barley	nucleus	9.44	34.07
HORVU4Hr1G057220.1	Barley	nucleus	9.28	33.52
HORVU2Hr1G109410.1	Barley	mitochondrion	8.68	31.67

Protein Annotations

EnsemblPlants:HORVU3Hr1G072260.1	EnsemblPlantsGene:HORVU3Hr1G072260	GO:GO:0000003	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987
GO:GO:0048578	PANTHER:PTHR33873	PANTHER:PTHR33873:SF3	SEG:seg	UniParc:UPI0002967B4C	UniProt:M0Z1T6
MapMan:15.5.36	:	:	:	:	:

Description

Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0Z1T6]

Coordinates

chrchr3H:+:544451421..544456667

Molecular Weight (calculated)

73664.1 Da

IEP (calculated)

7.407

GRAVY (calculated)

-0.815

Length

657 amino acids

Sequence
(BLAST)

001: MTLFYRTTLS TLTTSRGFLP IYSVRRAHPP PPFCRGRRFS ASRPSKVAAI PSERASERER EKEKDTKLYE HLSSRRAKRG RGRRTARPPS TPSLPPSAAP
101: TDRSGTARAS AMRKGSSRSG SARHQQFRAR AKTRVDDLQD MFSGLQYARK EARSTDAVLL EAQLHQMLRE WRAELSVPSP ASSLQAGNDN RDQSDPPSET
201: PRPPQLAAAE EEDDATSQLV EQLPRPSADQ ARRHPQGGDH DMKPEPREEA IADPVTVAQQ PPSLGQGVMA TPATAVFHDQ MYYVNQELTV EDFLYDDDYK
301: INLPGSNPEI LNNLEGIGQQ EYPQFNLPQE LPPNAYLDMS NYGQNAGDVF LHMSDLLTTM TPAPASFLRP KCALWDCPRP AQGSERWQDY CSMYHAELAV
401: KEEGPPGTMP VIRPRGIDLK DGPLFAALSA KIQGKHVGIP VCEGAATTKS PWNAPELFDL YIFEGESMRE WLFFDKPRRA FDSGNRKQRS LPDYNGRGWH
501: ESRKQVMKDF GGLKRSYYMD PQPSTSYEWH LYEYEINDRD AFALYRLEFK SSDAKKSAKS KFTCSPLIEI QQQMVRLSAD GPLENKRAAR GRTKDASANI
601: YPVQNSTAHD NAPDAYQAAA QVDQMAFLNG SVVYGPHLPY GYPTEGGDFY WNSNDGA

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.