CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90157	Canola	nucleus	93.67	93.87
CDY34095	Canola	nucleus	89.52	86.32
CDY30817	Canola	nucleus	90.39	85.71
AT1G28520.2	Thale cress	nucleus	88.43	83.33
KRH50133	Soybean	cytosol, nucleus, plastid	72.49	69.6
KRH20362	Soybean	cytosol, nucleus, plastid	72.49	69.46
VIT_10s0003g00500.t01	Wine grape	nucleus	72.05	68.04
KRH30880	Soybean	cytosol	66.38	66.23
PGSC0003DMT400058735	Potato	cytosol	47.16	65.26
KRH32695	Soybean	cytosol	65.72	64.73
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	64.85	62.26
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	63.1	61.88
PGSC0003DMT400081241	Potato	cytosol	62.66	61.46
Zm00001d022145_P001	Maize	cytosol	13.76	60.0
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	56.55	51.08
GSMUA_Achr1P27380_001	Banana	cytosol	30.79	50.0
Zm00001d041158_P001	Maize	cytosol	33.19	49.19
CDY64518	Canola	nucleus	46.72	45.63
CDX79871	Canola	nucleus	46.94	45.45
CDY14829	Canola	nucleus	47.82	45.06
Zm00001d045641_P001	Maize	cytosol	37.99	44.96
CDY47967	Canola	nucleus	46.94	44.42
GSMUA_Achr4P15020_001	Banana	nucleus	58.3	43.0
Os01t0753000-01	Rice	cytosol	49.78	42.7
TraesCS3D01G291600.1	Wheat	mitochondrion	50.66	42.57
Zm00001d043500_P006	Maize	mitochondrion	50.87	42.44
TraesCS1A01G335900.1	Wheat	nucleus	49.34	41.54
TraesCS3B01G326500.4	Wheat	mitochondrion	50.87	40.45
HORVU1Hr1G076620.2	Barley	nucleus	50.22	39.12
TraesCS1D01G338300.2	Wheat	nucleus	49.56	38.94
GSMUA_Achr6P22210_001	Banana	nucleus	45.63	38.92
TraesCS1B01G349200.1	Wheat	nucleus	48.91	38.23
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.24	38.1
EES18506	Sorghum	nucleus, plastid	50.22	37.77
Zm00001d038704_P002	Maize	plastid	48.69	36.92
KXG33380	Sorghum	mitochondrion	51.31	36.72
TraesCS3A01G291900.1	Wheat	nucleus	50.87	36.46
Os05t0515700-01	Rice	nucleus	50.66	36.19
Zm00001d012734_P002	Maize	cytosol	51.31	35.99
HORVU3Hr1G072260.1	Barley	plastid	51.09	35.62
GSMUA_Achr10P...	Banana	plasma membrane	57.86	34.51
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	6.11	34.15
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	5.46	31.25
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	7.21	30.28
HORVU2Hr1G109410.1	Barley	mitochondrion	11.57	29.44
HORVU6Hr1G038800.6	Barley	nucleus	6.55	29.41
HORVU7Hr1G111470.1	Barley	nucleus	5.02	29.11
HORVU6Hr1G038750.11	Barley	nucleus	10.92	27.47
HORVU4Hr1G057220.1	Barley	nucleus	10.7	26.92

Protein Annotations

EnsemblPlants:CDY35753	EnsemblPlantsGene:GSBRNA2T00059199001	GO:GO:0000003	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987
GO:GO:0048578	ncoils:Coil	PANTHER:PTHR33873	PANTHER:PTHR33873:SF1	ProteinID:CDY35753	ProteinID:CDY35753.1
UniParc:UPI0004EEF2A8	UniProt:A0A078HG07	MapMan:15.5.36	:	:	:

Description

BnaC03g58740DBnaC03g58740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HG07]

Coordinates

chrLK032359:+:362044..363781

Molecular Weight (calculated)

51039.0 Da

IEP (calculated)

5.152

GRAVY (calculated)

-0.605

Length

458 amino acids

Sequence
(BLAST)

001: MTGKRSKTTC RSVSHKLFKD KAKNRVDDLQ GMLLDLQFAR RESSALDVTL LEEQVNLMLR EWKSELNEPS TASSLQHGGG TLGSFSTDIC RLLQLCDEED
101: DATSKLAAPK PEPTDQNLEP YGPLADHCKD PPLVVGNNLD GTAHLDYNLQ QEFEPDFNGG FNDCPGYGVG GPLDISAFIP TICPPPSAFL GPKCALWDCP
201: RPAQGLDWFQ DYCSSFHAAL AFNEGPPGMN PVVRPGGIGL KDGLLFAALS AKAGGKDVGI PECEGAATAK SPWNAPELFD LTVLESETLR EWLFFDKPRR
301: AFESGNRKQR SLPDYNGRGW HESRKQVMSE FGGLKRSYYM DPQPLHHFEW HLYEYEINEC DACALYRLEL KLVFDGKKNS KGKLSTESVA DLQKQMRRLT
401: AEFPQENNNN KRCIKGRTKV NTKVATGNVQ NTAEQTNEYG VGEEFNYLVG NLTDYYVN

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.