CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34095	Canola	nucleus	96.27	97.89
CDY35753	Canola	nucleus	85.71	90.39
CDX90157	Canola	nucleus	85.51	90.37
AT1G28520.2	Thale cress	nucleus	89.65	89.09
Bra032913.1-P	Field mustard	mitochondrion, plastid	94.2	80.11
VIT_10s0003g00500.t01	Wine grape	nucleus	72.26	71.96
KRH50133	Soybean	cytosol, nucleus, plastid	71.01	71.91
KRH20362	Soybean	cytosol, nucleus, plastid	70.81	71.55
KRH30880	Soybean	cytosol	64.6	67.97
PGSC0003DMT400058735	Potato	cytosol	45.55	66.47
KRH32695	Soybean	cytosol	63.77	66.24
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	63.98	64.78
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	61.28	63.38
PGSC0003DMT400081241	Potato	cytosol	60.46	62.53
Zm00001d022145_P001	Maize	cytosol	13.25	60.95
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	56.52	53.85
GSMUA_Achr1P27380_001	Banana	cytosol	31.06	53.19
Zm00001d041158_P001	Maize	cytosol	31.47	49.19
CDX79871	Canola	nucleus	46.17	47.15
CDY64518	Canola	nucleus	45.55	46.91
CDY14829	Canola	nucleus	46.38	46.09
Zm00001d045641_P001	Maize	cytosol	36.65	45.74
CDY47967	Canola	nucleus	45.55	45.45
GSMUA_Achr4P15020_001	Banana	nucleus	57.14	44.44
Os01t0753000-01	Rice	cytosol	48.86	44.19
Zm00001d043500_P006	Maize	mitochondrion	49.28	43.35
TraesCS3D01G291600.1	Wheat	mitochondrion	48.65	43.12
TraesCS1A01G335900.1	Wheat	nucleus	47.83	42.46
TraesCS3B01G326500.4	Wheat	mitochondrion	49.28	41.32
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.38	41.27
HORVU1Hr1G076620.2	Barley	nucleus	49.69	40.82
GSMUA_Achr6P22210_001	Banana	nucleus	44.93	40.41
TraesCS1D01G338300.2	Wheat	nucleus	48.45	40.14
TraesCS1B01G349200.1	Wheat	nucleus	48.45	39.93
EES18506	Sorghum	nucleus, plastid	50.1	39.74
Zm00001d038704_P002	Maize	plastid	49.07	39.24
KXG33380	Sorghum	mitochondrion	50.31	37.97
Os05t0515700-01	Rice	nucleus	50.31	37.91
TraesCS3A01G291900.1	Wheat	nucleus	49.07	37.09
Zm00001d012734_P002	Maize	cytosol	49.48	36.6
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	6.21	36.59
GSMUA_Achr10P...	Banana	plasma membrane	57.97	36.46
HORVU3Hr1G072260.1	Barley	plastid	49.28	36.23
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	5.59	33.75
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	7.45	33.03
HORVU7Hr1G111470.1	Barley	nucleus	5.18	31.65
HORVU6Hr1G038800.6	Barley	nucleus	6.63	31.37
HORVU2Hr1G109410.1	Barley	mitochondrion	11.18	30.0
HORVU6Hr1G038750.11	Barley	nucleus	10.77	28.57
HORVU4Hr1G057220.1	Barley	nucleus	10.56	28.02

Protein Annotations

MapMan:15.5.36	UniProt:A0A078H000	EnsemblPlants:CDY30817	ProteinID:CDY30817	ProteinID:CDY30817.1	GO:GO:0000003
GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0048578	EnsemblPlantsGene:GSBRNA2T00046269001	PANTHER:PTHR33873
PANTHER:PTHR33873:SF1	UniParc:UPI0004EBAF49	:	:	:	:

Description

BnaC05g21930DBnaC05g21930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H000]

Coordinates

chrLK032261:+:267648..270263

Molecular Weight (calculated)

53943.4 Da

IEP (calculated)

5.529

GRAVY (calculated)

-0.625

Length

483 amino acids

Sequence
(BLAST)

001: MTGKRSKITC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRGVDVTL LEEQVNQMLR EWKSELNEPS PASSLQQEQG GTLGSFSTDI CRLLQLCDEE
101: DDATSKLAPP KPEPTDQNLE AGKAAVFQRG YNLVQEKSEH GFSLADDHGK DPCLVVGNNF DGTAHLDYNQ YDLQQEFEPN FNGGFNDCPT YGPLHISAFI
201: PTICPPPSAF LGPKCALWDC PRPAQGFDWF QDYCSSFHAA LAFNEGPPGM NPVVRPGGIG LKDGLLFAAL SAKAGGKDVG IPECEGAATA KSPWNAPELF
301: DLTVLESETL REWLFFDKPR RAFESGNRKQ RSLPDYNGRG WHESRKQIMS EFGGLKRSYY MDPQPLHHFE WHLYEYEINK CDACALYRLE LKLVVDGKKN
401: SKGKLSTDSV ADLQKQMGRL TAEFPQENVN NKRCIKGRPK VNTKVAATTT GNVQNTVVEQ GNEYGVGEEF NYLVGNLTDY YLP

Best Arabidopsis Sequence Match ( AT1G28520.5 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.