CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30880	Soybean	cytosol	92.26	93.46
KRH50133	Soybean	cytosol, nucleus, plastid	81.51	79.45
KRH20362	Soybean	cytosol, nucleus, plastid	81.08	78.87
VIT_10s0003g00500.t01	Wine grape	nucleus	73.76	70.72
Bra010864.1-P	Field mustard	nucleus	64.73	65.72
CDY35753	Canola	nucleus	64.73	65.72
CDX90157	Canola	nucleus	64.3	65.43
CDY34095	Canola	nucleus	66.02	64.63
AT1G28520.2	Thale cress	nucleus	67.1	64.2
CDY30817	Canola	nucleus	66.24	63.77
PGSC0003DMT400058735	Potato	cytosol	44.09	61.93
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	61.51	61.24
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	62.8	61.22
PGSC0003DMT400081241	Potato	cytosol	61.29	61.03
Zm00001d022145_P001	Maize	cytosol	13.12	58.1
Bra032913.1-P	Field mustard	mitochondrion, plastid	66.02	54.05
GSMUA_Achr1P27380_001	Banana	cytosol	32.26	53.19
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	56.77	52.07
KRH25675	Soybean	nucleus	50.54	49.06
KRH55846	Soybean	nucleus	50.11	48.74
Zm00001d041158_P001	Maize	cytosol	31.18	46.93
Os01t0753000-01	Rice	cytosol	50.97	44.38
GSMUA_Achr4P15020_001	Banana	nucleus	58.71	43.96
TraesCS3D01G291600.1	Wheat	mitochondrion	50.97	43.49
Zm00001d043500_P006	Maize	mitochondrion	50.97	43.17
Zm00001d045641_P001	Maize	cytosol	35.27	42.38
TraesCS1A01G335900.1	Wheat	nucleus	49.25	42.1
TraesCS3B01G326500.4	Wheat	mitochondrion	51.18	41.32
GSMUA_Achr6P22210_001	Banana	nucleus	47.53	41.15
TraesCS1D01G338300.2	Wheat	nucleus	51.4	40.99
TraesCS1B01G349200.1	Wheat	nucleus	50.97	40.44
HORVU1Hr1G076620.2	Barley	nucleus	50.97	40.31
HORVU3Hr1G023830.1	Barley	cytosol, plastid	5.38	39.68
EES18506	Sorghum	nucleus, plastid	51.83	39.57
Zm00001d038704_P002	Maize	plastid	49.89	38.41
KXG33380	Sorghum	mitochondrion	52.26	37.97
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	8.82	37.61
TraesCS3A01G291900.1	Wheat	nucleus	50.75	36.93
Os05t0515700-01	Rice	nucleus	50.75	36.82
HORVU3Hr1G072260.1	Barley	plastid	51.83	36.68
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	6.45	36.59
Zm00001d012734_P002	Maize	cytosol	50.54	35.99
GSMUA_Achr10P...	Banana	plasma membrane	58.49	35.42
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	6.02	35.0
HORVU7Hr1G111470.1	Barley	nucleus	5.81	34.18
HORVU6Hr1G038800.6	Barley	nucleus	6.88	31.37
HORVU2Hr1G109410.1	Barley	mitochondrion	11.61	30.0
HORVU6Hr1G038750.11	Barley	nucleus	11.4	29.12
HORVU4Hr1G057220.1	Barley	nucleus	10.75	27.47

Protein Annotations

EntrezGene:100820163	MapMan:15.5.36	EMBL:ACUP02006152	EnsemblPlantsGene:GLYMA_10G068900	GO:GO:0000003	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009791	GO:GO:0009987	GO:GO:0048578	UniProt:K7LHU8	EnsemblPlants:KRH32695	ProteinID:KRH32695
ProteinID:KRH32695.1	ProteinID:KRH32696.1	ProteinID:KRH32697.1	ProteinID:KRH32698.1	PANTHER:PTHR33873	PANTHER:PTHR33873:SF1
UniParc:UPI00023C8602	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:6788893..6792669

Molecular Weight (calculated)

51632.1 Da

IEP (calculated)

6.640

GRAVY (calculated)

-0.458

Length

465 amino acids

Sequence
(BLAST)

001: MKKISKSSCK SASHRLFKDK ARNHVDDLQV MFLDLQFARK ESRTIDAALL EEQVHQMLRE WKAELNETSP ASSLQQGGSL GSFSTDVYRL LQLCEEEDDA
101: TSPLVAPKSE PNDQIMQAGA KVIVQEGQHQ QEFRLLKECK HSTVGVPNIA ANNLDGTALE YHQFDIKDLD HSFYAGTGFC EEGGVPHISS YLPSVCPPPS
201: AFLGPKCALW DCPRPVQGLD WCQDYCSSFH ATLALNEGPP GMTPVLRPGG IGLKDNLLFA ALGAKAQGKV VGIPECEGAA TAKSPWNAPE LFDTCVLEGE
301: TIREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MNEFGGLKRS YYMDPQPLNL FEWHLYEYEI SKCDARALYR LELKLVDGKK SSKAKIVVTS
401: DSVAGLQKHI GSLSAKGRTK LGIGGGVYSA SNRVALQLNA PYQYGLTSSP YDDYVVDNTR DYYVT

Best Arabidopsis Sequence Match ( AT1G28520.1 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD
101: ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN
201: FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE
301: LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK
401: TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.