Factsheet for Os05t0515700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0309200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42400.1	Os03t0309200-01	AT2G18790.1	22904146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G076620.2	Barley	nucleus	66.77	72.79
TraesCS1D01G338300.2	Wheat	nucleus	65.05	71.53
HORVU3Hr1G023830.1	Barley	cytosol, plastid	7.02	71.43
EES18506	Sorghum	nucleus, plastid	67.08	70.61
Zm00001d022145_P001	Maize	cytosol	11.54	70.48
TraesCS1B01G349200.1	Wheat	nucleus	63.18	69.11
Zm00001d038704_P002	Maize	plastid	64.43	68.38
TraesCS1A01G335900.1	Wheat	nucleus	57.57	67.83
Os01t0753000-01	Rice	cytosol	54.91	65.92
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	7.96	62.2
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	7.49	60.0
HORVU7Hr1G111470.1	Barley	nucleus	6.71	54.43
KRH50133	Soybean	cytosol, nucleus, plastid	39.16	52.62
KRH20362	Soybean	cytosol, nucleus, plastid	39.16	52.51
PGSC0003DMT400081241	Potato	cytosol	38.22	52.46
Solyc02g077450.2.1	Tomato	cytosol, mitochondrion, nucleus	38.07	52.25
PGSC0003DMT400058735	Potato	cytosol	26.83	51.96
HORVU6Hr1G038800.6	Barley	nucleus	8.27	51.96
KRH30880	Soybean	cytosol	36.82	51.42
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	8.74	51.38
VIT_10s0003g00500.t01	Wine grape	nucleus	38.85	51.34
KRH32695	Soybean	cytosol	36.82	50.75
CDY35753	Canola	nucleus	36.19	50.66
CDX90157	Canola	nucleus	36.04	50.55
CDY34095	Canola	nucleus	37.44	50.53
Bra010864.1-P	Field mustard	nucleus	36.04	50.44
Solyc10g008880.2.1	Tomato	cytosol, mitochondrion	37.44	50.31
CDY30817	Canola	nucleus	37.91	50.31
GSMUA_Achr1P27380_001	Banana	cytosol	21.84	49.65
AT1G28520.2	Thale cress	nucleus	37.6	49.59
VIT_12s0028g02670.t01	Wine grape	mitochondrion, nucleus	39.94	48.39
GSMUA_Achr4P15020_001	Banana	nucleus	42.9	44.28
AT2G42400.1	Thale cress	nucleus	30.58	43.56
KRH55846	Soybean	nucleus	32.45	43.51
HORVU6Hr1G038750.11	Barley	nucleus	12.17	42.86
CDX79871	Canola	nucleus	31.51	42.71
CDY64518	Canola	nucleus	31.2	42.64
Bra032913.1-P	Field mustard	mitochondrion, plastid	37.6	42.43
KRH25675	Soybean	nucleus	31.67	42.38
Bra004691.1-P	Field mustard	nucleus	31.36	41.79
CDY14829	Canola	nucleus	31.36	41.36
Bra016879.1-P	Field mustard	nucleus	31.2	41.32
HORVU4Hr1G057220.1	Barley	nucleus	11.7	41.21
CDY47967	Canola	nucleus	31.05	41.12
GSMUA_Achr6P22210_001	Banana	nucleus	34.17	40.78
HORVU2Hr1G109410.1	Barley	mitochondrion	9.98	35.56

Protein Annotations

EnsemblPlants:Os05t0515700-01	EnsemblPlantsGene:Os05g0515700	EntrezGene:4339316	GO:GO:0000003	GO:GO:0006139	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791
GO:GO:0009987	GO:GO:0048578	PANTHER:PTHR33873	PANTHER:PTHR33873:SF3	ProteinID:BAF17955.1	ProteinID:BAS94884.1
RefSeq:XP_015640409.1	SEG:seg	UniParc:UPI0000E1257C	UniProt:Q0DGR8	MapMan:15.5.36	:

Description

vascular plant one zinc finger protein 2Target protein of bacterial effector, Xoo virulence (Os05t0515700-01)

Coordinates

chr5:+:25575639..25579739

Molecular Weight (calculated)

69905.9 Da

IEP (calculated)

5.434

GRAVY (calculated)

-0.744

Length

641 amino acids

Sequence
(BLAST)

001: MAGDPAAGGD GGRGSSGGKG SSPSSSRHQQ FRNLAKTRVD DLQEMFSGLQ SARKESRSAD AALLEEQVHH MLREWRAELN VPSPASSLQN SQSQGNNREA
101: SDPPSETLRL LQLAGAEEED DATSKLVMPR SPMPMQSSHE GHNLSPVLQG GTMAGGAAEL MVPRSPLQQM PSSHQSHGHG QDGGQNLQGE AVMGSTAATA
201: APHLGQGMQG DCGGMAGVTN AMFHDQLYYI DHELNIDDFL QDDDYKINLP GSNPDGPNTM QGIGQLEHQQ YNLPLDLPPN SFVDANNSAQ SSGDVFFHMS
301: DLLTTMCPSP SQYLGPKCAL WDCGRPVRGS DECQHYCNPY HAGLALNDDG LLGTRPVMRP RGIDLKDGPL FAALSAKVQG KNVGIPVCEG AATTKSPWNA
401: PELFDLSLLE GESLREWLFF DTPRRAFDSG NRKQRSLPDY NGRGWHESRK QVMKDFGGLK RSYYMDPQPS SNYEWHLFEY ETNDSDALAL YRLEYKSSDT
501: KRSVKSKLAS SPLSEIQQQM VRLSADSPVE SKRTARSRAK ANQKDNNSNA YPALNTPVQV SASNAHQTMS VNTPDQVNVS NAYQTMPLNT PNQPGPSNAY
601: HAASQMDQMT FLDGSVVYGP HLPYGYSTER SDFYWNPSDG T

Best Arabidopsis Sequence Match ( AT1G28520.3 )
(BLAST)

001: MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL LEEQVNQMLR EWKSELNEPS PASSLQQLCD EEDDATSKLA APKPEPADQN
101: LEAGKAAVFQ RGYNLVQGKS EHGLPLVDNC KDLSLAAGNN FDGTAPLEYH QQYDLQQEFE PNFNGGFNNC PSYGVVEGPI HISNFIPTIC PPPSAFLGPK
201: CALWDCPRPA QGFDWFQDYC SSFHAALAFN EGPPGMNPVV RPGGIGLKDG LLFAALSAKA GGKDVGIPEC EGAATAKSPW NAPELFDLTV LESETLREWL
301: FFDKPRRAFE SGNRKQRSLP DYNGRGWHES RKQIMVEFGG LKRSYYMDPQ PLHHFEWHLY EYEINKCDAC ALYRLELKLV DGKKTSKGKV SNDSVADLQK
401: QMGRLTAEFP PENNTTNTTN NNKRCIKGRP KVSTKVATGN VQNTVEQAND YGVGEEFNYL VGNLSDYYIP

Arabidopsis Description

VOZ1Transcription factor VOZ1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.