Factsheet for Bra016879.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001650.1-P
Bra022192.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42400.1	Bra001650.1-P	AT2G18790.1	22904146
AT2G42400.1	Bra022192.1-P	AT2G18790.1	22904146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47967	Canola	nucleus	90.5	90.5
CDY14829	Canola	nucleus	87.19	86.83
Bra004691.1-P	Field mustard	nucleus	80.58	81.08
AT2G42400.1	Thale cress	nucleus	69.63	74.89
Zm00001d022145_P001	Maize	cytosol	11.36	52.38
Bra010864.1-P	Field mustard	nucleus	45.25	47.82
KRH25675	Soybean	nucleus	44.63	45.09
KRH55846	Soybean	nucleus	44.01	44.56
VIT_12s0028g02670.t01	Wine grape	mitochondrion, nucleus	48.55	44.42
Zm00001d041158_P001	Maize	cytosol	27.69	43.37
GSMUA_Achr1P27380_001	Banana	cytosol	24.17	41.49
GSMUA_Achr7P10980_001	Banana	mitochondrion, nucleus	41.94	40.04
Zm00001d045641_P001	Maize	cytosol	31.82	39.79
Bra032913.1-P	Field mustard	mitochondrion, plastid	45.87	39.08
Zm00001d043500_P006	Maize	mitochondrion	44.21	38.98
Os01t0753000-01	Rice	cytosol	41.12	37.27
TraesCS3D01G291600.1	Wheat	mitochondrion	41.53	36.88
TraesCS1A01G335900.1	Wheat	nucleus	39.46	35.11
TraesCS3B01G326500.4	Wheat	mitochondrion	41.32	34.72
GSMUA_Achr4P15020_001	Banana	nucleus	44.01	34.3
TraesCS1D01G338300.2	Wheat	nucleus	40.91	33.96
KXG33380	Sorghum	mitochondrion	44.83	33.91
TraesCS1B01G349200.1	Wheat	nucleus	40.7	33.62
HORVU1Hr1G076620.2	Barley	nucleus	40.5	33.33
EES18506	Sorghum	nucleus, plastid	40.5	32.18
Zm00001d038704_P002	Maize	plastid	39.88	31.95
TraesCS3A01G291900.1	Wheat	nucleus	41.74	31.61
Os05t0515700-01	Rice	nucleus	41.32	31.2
HORVU3Hr1G072260.1	Barley	plastid	42.15	31.05
Zm00001d012734_P002	Maize	cytosol	41.74	30.93
GSMUA_Achr6P22210_001	Banana	nucleus	34.09	30.73
HORVU3Hr1G023830.1	Barley	cytosol, plastid	3.72	28.57
HORVU2Hr1G042110.1	Barley	cytosol, mitochondrion, nucleus	6.4	28.44
HORVU5Hr1G058480.1	Barley	cytosol, mitochondrion, nucleus	4.75	28.05
HORVU4Hr1G057240.1	Barley	cytosol, mitochondrion, nucleus, plastid	4.55	27.5
GSMUA_Achr10P...	Banana	plasma membrane	43.59	27.47
HORVU7Hr1G111470.1	Barley	nucleus	4.34	26.58
HORVU2Hr1G109410.1	Barley	mitochondrion	9.5	25.56
HORVU6Hr1G038800.6	Barley	nucleus	5.17	24.51
HORVU6Hr1G038750.11	Barley	nucleus	9.09	24.18
HORVU4Hr1G057220.1	Barley	nucleus	8.68	23.08

Protein Annotations

MapMan:15.5.36	EnsemblPlantsGene:Bra016879	EnsemblPlants:Bra016879.1	EnsemblPlants:Bra016879.1-P	ncoils:Coil	GO:GO:0000003
GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0048578	UniProt:M4DK51	PANTHER:PTHR33873
PANTHER:PTHR33873:SF4	UniParc:UPI00025438E3	:	:	:	:

Description

AT2G42400 (E=1e-204) VOZ2, ATVOZ2 | VOZ2 (VASCULAR PLANT ONE ZINC FINGER PROTEIN 2); transcription activator

Coordinates

chrA04:-:17769354..17771156

Molecular Weight (calculated)

54445.5 Da

IEP (calculated)

5.347

GRAVY (calculated)

-0.729

Length

484 amino acids

Sequence
(BLAST)

001: MSNHQKITCV SSSHQNLVEK LMQLQERFSH LQAARKEGRV NDHAVLEAQI SQNLREWQAE LTAPSPECSL LGGSISHFSE EIARLLKLND EEDDATSSLK
101: EHDAPKPDGF DQSLCPPPEH WEWIDEPFCQ SPFNVNFSCG FEEAVNNNTQ PHDQQLHFAF QEFDPSINTA PDFHVQNNLD IASQLDYHLS EVRQEFNSSP
201: SVKLDASENY TDFTTPQSVC VPPPPSAFLG PKCALWDCTR PAHGSDWYLD YCSDYHGNLA LNEDSPGTAP VLRPGGISLK DNLLIDALRA KTLGKNVGIP
301: VCEGAVNTKC PWNAAELFHL ELVEGETIRE WLFFDKPRRA YDSGNRKQRS LSDYSGRGWH ESRKQLMKEQ EGQKRSYYMD PQPPGLFEWH LFEYQINESD
401: VCALYRLELK LTNGKKCPKG RVAKDPLADL QKKMEKMGQL TPEVASDKPS PPTKGRTKST KGVKVATQDT PVPATVANEP SSHQ

Best Arabidopsis Sequence Match ( AT2G42400.1 )
(BLAST)

001: MSNHPKITSA HQNVEEKLRE LQERFCHLQA ARKEGRHGDL ALLEAQISQN IREWQAELTA PSPESSLLGE GISQFLEEFA PLLKLDEEDD ATSTLKEHAG
101: AKPDPEGFSQ SLCPPEWTSE NFSQSPFNGN FSCGFEDALN STETHGQQLH YGYEGFDPSI NSAPDFHDQK LSSNLDITSQ YDYIFSEVRQ ELDNSPSTKL
201: DSSEEIDNFA EFSTPSSVRV PPSAFLGPKC ALWDCTRPAQ GSEWYLDYCS NYHGTLALNE DSPGTAPVLR PGGISLKDNL LIDALRAKTQ GKNVGIPVCE
301: GAVNTKCPWN AAELFHLELV EGETIREWLF FDKPRRAYDS GNRKQRSLPD YSGRGWHESR KQLMKEQEGQ KRSYYMDPQP PGPFEWHLFE YQINESDACA
401: LYRLELKVGN GKKSPKGKIS KDPLADLQKK MGQFKVASDK PSPPTKGRKE

Arabidopsis Description

VOZ2VOZ2 [Source:UniProtKB/TrEMBL;Acc:A0A178VSV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.