Factsheet for HORVU1Hr1G069840.13

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	mitochondrion
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48240.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944
AT3G17440.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P07950_001	Banana	cytosol	13.11	67.5
HORVU2Hr1G026870.4	Barley	plastid	43.2	32.48
AT1G48240.1	Thale cress	cytosol	22.33	17.36
Bra001663.1-P	Field mustard	cytosol	22.82	17.34
Bra021248.1-P	Field mustard	cytosol	22.82	17.34
CDX75916	Canola	cytosol	22.82	17.34
CDX82368	Canola	cytosol	22.82	17.34
CDY63023	Canola	cytosol	22.82	17.34
CDY48701	Canola	cytosol	22.82	17.34
AT3G17440.1	Thale cress	cytosol	22.33	17.1
VIT_05s0020g00750.t01	Wine grape	cytosol	22.33	17.1
KRH19506	Soybean	cytosol	21.84	16.73
PGSC0003DMT400011730	Potato	cytosol	21.84	16.67
Solyc12g098950.1.1	Tomato	cytosol	21.84	16.67
CDX92133	Canola	cytosol	21.84	16.61
KRH02465	Soybean	cytosol	21.36	16.36
CDY66384	Canola	cytosol	21.36	16.24
Bra022216.1-P	Field mustard	cytosol	21.36	16.24
HORVU7Hr1G091500.1	Barley	cytosol	19.9	15.71
CDY53169	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	9.22	14.84
CDX77329	Canola	cytosol	13.11	11.89
CDY41849	Canola	cytosol	6.8	9.15
Bra014118.1-P	Field mustard	cytosol	6.8	9.15
CDY41852	Canola	cytosol	5.83	7.84
GSMUA_Achr2P07960_001	Banana	cytosol	3.88	7.84
HORVU2Hr1G084560.1	Barley	extracellular, plasma membrane	3.88	5.44

Protein Annotations

EnsemblPlants:HORVU1Hr1G069840.13	EnsemblPlantsGene:HORVU1Hr1G069840	PANTHER:PTHR21230	PANTHER:PTHR21230:SF35	SEG:seg	SignalP:SignalP-noTM
UniParc:UPI000B478D09	UniProt:A0A287G3T2	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:487205300..487215312

Molecular Weight (calculated)

22827.9 Da

IEP (calculated)

6.295

GRAVY (calculated)

-0.360

Length

206 amino acids

Sequence
(BLAST)

001: TLLPLLAPSA ALLASIGRAA PHATGRIPLG VGGDPAAAMA ASDVPMSPEL EQIDGEIQDI FRALQNGFQK IDKIKDSNRQ RAWWTSCGGG FPRNSTSCGR
101: ANSGHAFPCR CEEQQPCDTA SPPGHDFFDL MLSRYHLHTR PDIEELESKQ YNYTKKISIF QNMVQELAIS YTDLHYFRTA HYFHVCSDYS VGYFIDSEGL
201: NITLGR

Best Arabidopsis Sequence Match ( AT3G17440.2 )
(BLAST)

001: MASNLPMSPQ LEQIHGEIRD HFRALANGFQ RLDKIKDSTR QSKQLEELTD KMRECKRLVK EFDRELKDEE ARNSPEVNKQ LNDEKQSMIK ELNSYVALRK
101: TYMSTLGNKK VELFDMGAGV SGEPTAEENV QVASSMSNQE LVDAGMKRMD ETDQAIERSK QVVEQTLEVG TQTAANLKGQ TDQMGRVVNH LDTIQFSIKK
201: ASQLVKEIGR QVCGYR

Arabidopsis Description

NPSN13Novel plant SNARE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRP1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.