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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • endoplasmic reticulum 1
  • mitochondrion 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P07950_001 Banana cytosol 12.5 40.0
CDX82368 Canola cytosol 67.19 31.73
CDX75916 Canola cytosol 67.19 31.73
CDY63023 Canola cytosol 67.19 31.73
CDY66384 Canola cytosol 65.62 31.0
CDY48701 Canola cytosol 65.62 31.0
CDX92133 Canola cytosol 64.84 30.63
CDY41849 Canola cytosol 34.38 28.76
KRH19506 Soybean cytosol 58.59 27.88
CDX77329 Canola cytosol 49.22 27.75
KRH02465 Soybean cytosol 57.81 27.51
Solyc12g098950.1.1 Tomato cytosol 57.81 27.41
GSMUA_Achr11P... Banana cytosol 55.47 26.69
GSMUA_Achr2P07740_001 Banana cytosol 56.25 26.67
PGSC0003DMT400011730 Potato cytosol 55.47 26.3
VIT_05s0020g00750.t01 Wine grape cytosol 53.91 25.65
GSMUA_Achr5P21000_001 Banana cytosol 53.12 25.56
Zm00001d006939_P001 Maize cytosol 52.34 25.28
Os07t0637400-01 Rice plasma membrane 52.34 25.19
TraesCS2B01G174800.1 Wheat cytosol 52.34 24.91
EER97617 Sorghum cytosol 52.34 24.91
Zm00001d029281_P007 Maize extracellular, plasma membrane 53.12 24.73
EER92219 Sorghum cytosol 52.34 24.54
TraesCS2D01G154800.1 Wheat cytosol 51.56 24.54
Zm00001d022275_P001 Maize plasma membrane 50.78 24.53
TraesCS2A01G149700.1 Wheat cytosol 50.78 24.16
TraesCS4B01G157900.2 Wheat cytosol 50.78 23.81
TraesCS4D01G161700.1 Wheat cytosol 50.78 23.81
HORVU2Hr1G026870.4 Barley plastid 50.0 23.36
Os03t0369800-01 Rice plasma membrane 50.0 23.27
TraesCS4A01G162300.1 Wheat cytosol 49.22 23.08
CDY31671 Canola cytosol, nucleus, peroxisome 42.97 20.83
CDX84253 Canola cytosol, nucleus, peroxisome 42.19 20.45
CDY69072 Canola cytosol, golgi, peroxisome 40.62 19.85
CDY59046 Canola cytosol, golgi, peroxisome 40.62 19.85
CDX84617 Canola cytosol, golgi, peroxisome 40.62 19.85
CDY41852 Canola cytosol 22.66 18.95
GSMUA_Achr2P07960_001 Banana cytosol 10.16 12.75
HORVU1Hr1G069840.13 Barley extracellular 14.84 9.22
Protein Annotations
EnsemblPlants:CDY53169EnsemblPlantsGene:GSBRNA2T00008718001PANTHER:PTHR21230PANTHER:PTHR21230:SF35ProteinID:CDY53169ProteinID:CDY53169.1
UniParc:UPI0004EF083EUniProt:A0A078IUS1MapMan:22.7.2.4:::
Description
BnaA06g40480DBnaA06g40480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUS1]
Coordinates
chrLK033173:-:14103..15666
Molecular Weight (calculated)
14426.1 Da
IEP (calculated)
5.674
GRAVY (calculated)
-0.439
Length
128 amino acids
Sequence
(BLAST)
001: MASNRPMSPR LEQIHGEIRD HFRALAYDFI LSLYCAYYFG LISRIQLDKA SSGEPAAEEN VQMASSMSNQ EFVDAGMKRM DETDQAIERS KQVSYRKEVV
101: EQTLEVGTQT AANLKGQSIH VSCLKFPS
Best Arabidopsis Sequence Match ( AT3G17440.2 )
(BLAST)
001: MASNLPMSPQ LEQIHGEIRD HFRALANGFQ RLDKIKDSTR QSKQLEELTD KMRECKRLVK EFDRELKDEE ARNSPEVNKQ LNDEKQSMIK ELNSYVALRK
101: TYMSTLGNKK VELFDMGAGV SGEPTAEENV QVASSMSNQE LVDAGMKRMD ETDQAIERSK QVVEQTLEVG TQTAANLKGQ TDQMGRVVNH LDTIQFSIKK
201: ASQLVKEIGR QVCGYR
Arabidopsis Description
NPSN13Novel plant SNARE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRP1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.